RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 VCANP13611 3396 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 IGKV1-17P01599 117 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 RPL39LQ96EH5 51 aaKnown RBP3.06□□□□□ -1.92
RGPD1-202ENST00000409776 SRCAPQ6ZRS2 3230 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 CHD3Q12873 2000 aaKnown RBP3.06□□□□□ -1.92
RGPD1-202ENST00000409776 CDC42BPBQ9Y5S2 1711 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 IGLV3-10A0A075B6K4 115 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 INAFM1C9JVW0 142 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 IGKV2-28A0A075B6P5 120 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 IGKV2D-28P01615 120 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 C11orf1Q9H5F2 150 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 KNTC1P50748 2209 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 CACNA1IQ9P0X4 2223 aa3.06□□□□□ -1.92
RGPD1-202ENST00000409776 PIK3C2BO00750 1634 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 NTM-AS1Q6ZSK4 140 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 MED1Q15648 1581 aaPredicted RBP3.05□□□□□ -1.92
RGPD1-202ENST00000409776 KIF1BO60333 1816 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 J3QL48 77 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 SPART-AS1P0CW21 52 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 ERCC6L2Q5T890 1561 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 ANKRD26Q9UPS8 1709 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 SYCNQ0VAF6 134 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 CSRP2Q16527 193 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 FGF22Q9HCT0 170 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 MTCL1Q9Y4B5 1905 aaKnown RBP3.05□□□□□ -1.92
RGPD1-202ENST00000409776 ITSN1Q15811 1721 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
RGPD1-202ENST00000409776 FAM27E3Q08E93 113 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 Q1T7F1 81 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 OTOFQ9HC10 1997 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 QRICH2Q9H0J4 1663 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 LINC00575Q6W349 94 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 CRYBG1Q9Y4K1 1723 aa3.05□□□□□ -1.92
RGPD1-202ENST00000409776 PRR3P79522 188 aaKnown RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 FHL5Q5TD97 284 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 C6orf223Q8N319 242 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 AMELYQ99218 206 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 TNRC6BQ9UPQ9 1833 aaKnown RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 ALKQ9UM73 1620 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 PIN1P1O15428 100 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 DAZAP2Q15038 168 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 CEMP1Q6PRD7 247 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 RICTORQ6R327 1708 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 ZNF22P17026 224 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 PRO0461Q9UI25 63 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 UNC80Q8N2C7 3258 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 CLTCQ00610 1675 aaKnown RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 NFAT5O94916 1531 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 EPOPA6NHQ4 379 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 F8W735 103 aaPredicted RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 LY6LH3BQJ8 138 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 COL6A3P12111 3177 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 CHD2O14647 1828 aaKnown RBP3.04□□□□□ -1.92
RGPD1-202ENST00000409776 LY6G6EA0A0G2JKS1 128 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 HRKO00198 91 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 LINC00271P0C7V0 271 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 LENEPQ9Y5L5 61 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 TNS2Q63HR2 1409 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 MYH3P11055 1940 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 OVOL3O00110 214 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 NUPR1O60356 82 aa3.04□□□□□ -1.92
RGPD1-202ENST00000409776 FAM19A4Q96LR4 140 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 TP53AIP1Q9HCN2 124 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 C10orf55Q5SWW7 151 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 RIMS1Q86UR5 1692 aaKnown RBP3.03□□□□□ -1.92
RGPD1-202ENST00000409776 SCN9AQ15858 1988 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 SCN5AQ14524 2016 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 SVILO95425 2214 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 SNED1Q8TER0 1413 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 MYO7BQ6PIF6 2116 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 NWD1Q149M9 1564 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 LMO7DNF2Z398 122 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 B3GALT5-AS1P59052 145 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 PRR9Q5T870 116 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 C16orf47Q6ZP98 133 aaPredicted RBP3.03□□□□□ -1.92
RGPD1-202ENST00000409776 IFT172Q9UG01 1749 aa3.03□□□□□ -1.92
RGPD1-202ENST00000409776 IBA57-AS1B1ANH7 110 aa3.03□□□□□ -1.93
RGPD1-202ENST00000409776 PRO3102Q9H379 93 aa3.03□□□□□ -1.93
RGPD1-202ENST00000409776 URB1O60287 2271 aaKnown RBP3.03□□□□□ -1.93
RGPD1-202ENST00000409776 BPTFQ12830 3046 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 CDH23Q9H251 3354 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 BCE1O60756 84 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 C11orf71Q6IPW1 123 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 ELSPBP1Q96BH3 223 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 RANBP2P49792 3224 aaKnown RBP3.02□□□□□ -1.93
RGPD1-202ENST00000409776 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 N4BP2Q86UW6 1770 aaPredicted RBP3.02□□□□□ -1.93
RGPD1-202ENST00000409776 PREX1Q8TCU6 1659 aa3.02□□□□□ -1.93
RGPD1-202ENST00000409776 LHFPL6Q9Y693 200 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms