RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MRPL23Q16540 153 aaKnown RBP15.26■□□□□ 0.03
SHANK1-203ENST00000391813 SLC25A29Q8N8R3 303 aa15.26■□□□□ 0.03
SHANK1-203ENST00000391813 CRIP3Q6Q6R5 217 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 LINC00643Q86TS7 51 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 OBSL1O75147 1896 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 CTSGP08311 255 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 LOXL1Q08397 574 aaPredicted RBP15.25■□□□□ 0.03
SHANK1-203ENST00000391813 NPBQ8NG41 125 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 RS1O15537 224 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 XCL2Q9UBD3 114 aa15.25■□□□□ 0.03
SHANK1-203ENST00000391813 MT-ATP8P03928 68 aa15.24■□□□□ 0.03
SHANK1-203ENST00000391813 RNASE13Q5GAN3 156 aaKnown RBP15.24■□□□□ 0.03
SHANK1-203ENST00000391813 MRPL36Q9P0J6 103 aaKnown RBP15.24■□□□□ 0.03
SHANK1-203ENST00000391813 ADAMTS9Q9P2N4 1935 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 C9orf47Q6ZRZ4 202 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 MRAPQ8TCY5 172 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 FREM1Q5H8C1 2179 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 C1orf43Q9BWL3 253 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 TCL1BO95988 128 aa15.23■□□□□ 0.03
SHANK1-203ENST00000391813 LINC00322Q6ZN03 302 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-203ENST00000391813 NXPH4O95158 308 aa15.22■□□□□ 0.03
SHANK1-203ENST00000391813 BRWD1-AS2P59051 145 aa15.22■□□□□ 0.03
SHANK1-203ENST00000391813 LGALS9O00182 355 aa15.21■□□□□ 0.03
SHANK1-203ENST00000391813 IGLV2-23P01705 113 aa15.21■□□□□ 0.03
SHANK1-203ENST00000391813 IGKV1D-37A0A075B6S9 117 aa15.21■□□□□ 0.03
SHANK1-203ENST00000391813 F6UB75 175 aa15.21■□□□□ 0.03
SHANK1-203ENST00000391813 SEM1Q6ZVN7 128 aa15.21■□□□□ 0.02
SHANK1-203ENST00000391813 TEX22C9J3V5 150 aa15.2■□□□□ 0.02
SHANK1-203ENST00000391813 Q8N1Y9 231 aa15.2■□□□□ 0.02
SHANK1-203ENST00000391813 RPL35AP18077 110 aaKnown RBP15.2■□□□□ 0.02
SHANK1-203ENST00000391813 PROP1O75360 226 aa15.19■□□□□ 0.02
SHANK1-203ENST00000391813 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
SHANK1-203ENST00000391813 DEFB130BP0DP73 79 aa15.19■□□□□ 0.02
SHANK1-203ENST00000391813 DEFB130AP0DP74 79 aa15.19■□□□□ 0.02
SHANK1-203ENST00000391813 TNCP24821 2201 aa15.18■□□□□ 0.02
SHANK1-203ENST00000391813 RPL39P62891 51 aaKnown RBP15.18■□□□□ 0.02
SHANK1-203ENST00000391813 C10orf105Q8TEF2 133 aa15.18■□□□□ 0.02
SHANK1-203ENST00000391813 E7EUB6 86 aa15.18■□□□□ 0.02
SHANK1-203ENST00000391813 NDUFC2O95298 119 aa15.18■□□□□ 0.02
SHANK1-203ENST00000391813 TP73-AS1Q9UF72 201 aa15.18■□□□□ 0.02
SHANK1-203ENST00000391813 C10orf142B7Z368 130 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 SND1-IT1Q9HBX3 110 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.17■□□□□ 0.02
SHANK1-203ENST00000391813 IGKV2-29A2NJV5 120 aaPredicted RBP15.17■□□□□ 0.02
SHANK1-203ENST00000391813 C16orf54Q6UWD8 224 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 IGKV3D-7A0A0C4DH55 119 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 UQCRQO14949 82 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 NACAE9PAV3 2078 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 IGHV7-81A0A0B4J1V7 117 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 PRAC2D3DTV9 90 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 ELANEP08246 267 aa15.17■□□□□ 0.02
SHANK1-203ENST00000391813 HIVEP2P31629 2446 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 JMJD7-PLA2G4BH0Y9G9 81 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 SPRY2O43597 315 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 RITA1Q96K30 269 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 IGF2RP11717 2491 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 IGLC6P0CF74 106 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 SPATA25Q9BR10 227 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 LINC01619G3V211 115 aa15.16■□□□□ 0.02
SHANK1-203ENST00000391813 IGHV4-61A0A0C4DH41 118 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 hADV29S1A0JD25 119 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 EIF4EBP1Q13541 118 aaPredicted RBP15.15■□□□□ 0.02
SHANK1-203ENST00000391813 SPRNQ5BIV9 151 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 C2orf91Q6ZV80 131 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 ATRXP46100 2492 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 IGLV1-47P01700 117 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 PSMB8P28062 276 aa15.15■□□□□ 0.02
SHANK1-203ENST00000391813 DYSFO75923 2080 aa15.14■□□□□ 0.01
SHANK1-203ENST00000391813 CGB3P0DN86 165 aa15.14■□□□□ 0.01
SHANK1-203ENST00000391813 CGB7P0DN87 165 aa15.14■□□□□ 0.01
SHANK1-203ENST00000391813 DEFB121Q5J5C9 76 aa15.14■□□□□ 0.01
SHANK1-203ENST00000391813 IGHV1-58A0A0C4DH39 117 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 ZNF561-AS1K7EIQ3 104 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 VPREB3Q9UKI3 123 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 IGHV4-30-2A0A087WSY4 118 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 RNF152Q8N8N0 203 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 CRYGBP07316 175 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 CLEC2BQ92478 149 aa15.13■□□□□ 0.01
SHANK1-203ENST00000391813 ZNF106Q9H2Y7 1883 aaKnown RBP15.12■□□□□ 0.01
SHANK1-203ENST00000391813 LINC00574Q9H8X3 128 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 H3BQ85 93 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 CSPG4Q6UVK1 2322 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 TRAV25A0A0B4J276 109 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 CENPVL3A0A0U1RRI6 287 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 C20orf203Q8NBC4 194 aa15.12■□□□□ 0.01
SHANK1-203ENST00000391813 CITED2Q99967 270 aaPredicted RBP15.11■□□□□ 0.01
SHANK1-203ENST00000391813 IGHG2P01859 326 aa15.11■□□□□ 0.01
SHANK1-203ENST00000391813 IGKV2D-26A0A0A0MRZ7 120 aa15.1■□□□□ 0.01
SHANK1-203ENST00000391813 CDK2AP2O75956 126 aa15.1■□□□□ 0.01
SHANK1-203ENST00000391813 U3KQK5 164 aa15.1■□□□□ 0.01
SHANK1-203ENST00000391813 IGHV3-30-3P0DP02 117 aa15.1■□□□□ 0.01
SHANK1-203ENST00000391813 U3KQE9 123 aa15.09■□□□□ 0.01
SHANK1-203ENST00000391813 HOXD3P31249 432 aaPredicted RBP15.09■□□□□ 0.01
SHANK1-203ENST00000391813 DEFB112Q30KQ8 113 aa15.09■□□□□ 0.01
SHANK1-203ENST00000391813 VSIG2Q96IQ7 327 aa15.09■□□□□ 0.01
SHANK1-203ENST00000391813 OPRPNQ99935 248 aaPredicted RBP15.09■□□□□ 0.01
SHANK1-203ENST00000391813 HOXB4P17483 251 aaPredicted RBP15.09■□□□□ 0.01
SHANK1-203ENST00000391813 LINC00310P59036 64 aa15.09■□□□□ 0.01
SHANK1-203ENST00000391813 NEXN-AS1Q8NBZ9 246 aa15.09■□□□□ 0.01
SHANK1-203ENST00000391813 CFHR3Q02985 330 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms