RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 AMTNQ6UX39 209 aa4.04□□□□□ -1.76
SMNDC1-202ENST00000369603 PGPEP1Q9NXJ5 209 aa4.04□□□□□ -1.76
SMNDC1-202ENST00000369603 COL27A1Q8IZC6 1860 aaPredicted RBP4.04□□□□□ -1.76
SMNDC1-202ENST00000369603 A0A087WX48 190 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 TRAV8-2A0A0B4J237 113 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 CLPSL1A2RUU4 121 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 H3BMG7 143 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 SPINK8P0C7L1 97 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 TMEM61Q8N0U2 210 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 DLX4Q92988 240 aaPredicted RBP4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 U3KQE9 123 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 HTN3P15516 51 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 SPATA12Q7Z6I5 190 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 C3orf56Q8N813 242 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 RASL10AQ92737 203 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 MYO9AB2RTY4 2548 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 TET2Q6N021 2002 aaPredicted RBP4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 F8W1H4 67 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 Q8N1Y9 231 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 DNAJC30Q96LL9 226 aa4.03□□□□□ -1.76
SMNDC1-202ENST00000369603 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 GATA1P15976 413 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 CRIP1P50238 77 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 C9orf66Q5T8R8 295 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 ZNF702PQ9H963 129 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 USP9YO00507 2555 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 PKD1L2Q7Z442 2459 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 G3V4G9 280 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 SUMO4Q6EEV6 95 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 TTTY13Q9BZ97 58 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 TOMM7Q9P0U1 55 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 AVPP01185 164 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 DEFB130BP0DP73 79 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 DEFB130AP0DP74 79 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 FXYD2P54710 66 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 CFAP161Q6P656 301 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 APRG1Q8IVJ8 170 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 CEND1Q8N111 149 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 USP9XQ93008 2570 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 DOPEY1Q5JWR5 2465 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 F8W735 103 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 ZFAND2AQ8N6M9 145 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 ZNRF2Q8NHG8 242 aa4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 CITED2Q99967 270 aaPredicted RBP4.02□□□□□ -1.77
SMNDC1-202ENST00000369603 DSCAML1Q8TD84 2053 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 IGHV3-16A0A0C4DH30 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 TAL2Q16559 108 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 ZFAND6Q6FIF0 208 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 Q6ZSV7 163 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 Q71RC1 249 aaPredicted RBP4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 NEGR1Q7Z3B1 354 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 C16orf74Q96GX8 76 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 C20orf173Q96LM9 149 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE12JA6NER3 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE7O76087 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE12FP0CL80 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE12GP0CL81 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE12IP0CL82 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 INSL3P51460 131 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 DEFB1P60022 68 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE4Q13068 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE5Q13069 117 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 RPL39LQ96EH5 51 aaKnown RBP4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 TMEM243Q9BU79 118 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 PRRC2AP48634 2157 aaKnown RBP4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 LAMA2P24043 3122 aaKnown RBP4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 TRAV12-1A0A0B4J245 112 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 PRSS29PA6NIE9 313 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 WFDC2Q14508 124 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 C12orf74Q32Q52 190 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 COX8CQ7Z4L0 72 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 PIFOQ8TCI5 191 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 MAP6D1Q9H9H5 199 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 SPANXA1Q9NS26 97 aa4.01□□□□□ -1.77
SMNDC1-202ENST00000369603 IGHV3-64A0A075B6Q5 118 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 PLA2G2AP14555 144 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 MALP21145 153 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE2BQ13066 116 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 DEFB114Q30KQ6 69 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE2EQ4V326 116 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 ZFP2Q6ZN57 461 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 GAGE2DQ9UEU5 116 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 U3KQK5 164 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 WNK1Q9H4A3 2382 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 H3BMM0 161 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 DAD1P61803 113 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 LRRK2Q5S007 2527 aa4□□□□□ -1.77
SMNDC1-202ENST00000369603 IGLL5B9A064 214 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms