RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CGB7P0DN87 165 aa10.33□□□□□ -0.76
PTPRK-204ENST00000368210 SMIM9A6NGZ8 99 aa10.33□□□□□ -0.76
PTPRK-204ENST00000368210 CTSGP08311 255 aa10.33□□□□□ -0.76
PTPRK-204ENST00000368210 IGHV4-30-2A0A087WSY4 118 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 RS1O15537 224 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 HAMPP81172 84 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 Q8N9W7 124 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 TEX22C9J3V5 150 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 NDUFA7O95182 113 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 Q8N7P7 452 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 SMIM2Q9BVW6 85 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 IGHV4-38-2P0DP08 117 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 MRPL36Q9P0J6 103 aaKnown RBP10.32□□□□□ -0.76
PTPRK-204ENST00000368210 NAV2Q8IVL1 2488 aa10.32□□□□□ -0.76
PTPRK-204ENST00000368210 F6UB75 175 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 MRPL53Q96EL3 112 aaKnown RBP10.31□□□□□ -0.76
PTPRK-204ENST00000368210 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 CEP192Q8TEP8 1941 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 BAALC-AS2P0C853 105 aa10.31□□□□□ -0.76
PTPRK-204ENST00000368210 BLCAPP62952 87 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 IGHG2P01859 326 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 ZFP36P26651 326 aaKnown RBP10.3□□□□□ -0.76
PTPRK-204ENST00000368210 SRSF2Q01130 221 aaKnown RBP10.3□□□□□ -0.76
PTPRK-204ENST00000368210 RBAKDNA6NC62 111 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 CCDC179H3BU77 68 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 FOXE3Q13461 319 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 C22orf34Q6ZV56 151 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 HIVEP2P31629 2446 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
PTPRK-204ENST00000368210 J3QKU1 62 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 Q71RC1 249 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-204ENST00000368210 C10orf105Q8TEF2 133 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 I3L3M4 83 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 K7EMI3 77 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 CRYGCP07315 174 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 LINC00574Q9H8X3 128 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 DAZAP2Q15038 168 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-204ENST00000368210 BUB3O43684 328 aa10.29□□□□□ -0.76
PTPRK-204ENST00000368210 CFHR4Q92496 578 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 JPT2Q9H910 190 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 PTPRSQ13332 1948 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 MYO9AB2RTY4 2548 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-204ENST00000368210 TM2D2Q9BX73 214 aa10.28□□□□□ -0.76
PTPRK-204ENST00000368210 SHISA2Q6UWI4 295 aa10.27□□□□□ -0.76
PTPRK-204ENST00000368210 Q8N1Y9 231 aa10.27□□□□□ -0.76
PTPRK-204ENST00000368210 hADV29S1A0JD25 119 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 ZNF295-AS1Q8N0V1 137 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 CRYGBP07316 175 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 A4D1N5 150 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 GNRH2O43555 120 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 C20orf173Q96LM9 149 aa10.27□□□□□ -0.77
PTPRK-204ENST00000368210 A0A0U1RQV1 116 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 PIFOQ8TCI5 191 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 NUP210LQ5VU65 1888 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 WI2-2373I1.2A0A1W2PRP0 233 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 PSMB8P28062 276 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 NAV3Q8IVL0 2385 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 PRB1P04280 392 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 FRMD6-AS1P0C7T7 363 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 XGP55808 180 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
PTPRK-204ENST00000368210 IGKV3D-7A0A0C4DH55 119 aa10.25□□□□□ -0.77
PTPRK-204ENST00000368210 CFHR3Q02985 330 aa10.25□□□□□ -0.77
PTPRK-204ENST00000368210 TP53TG3Q9ULZ0 132 aa10.25□□□□□ -0.77
PTPRK-204ENST00000368210 SIRPDQ9H106 197 aa10.25□□□□□ -0.77
PTPRK-204ENST00000368210 TRAV12-1A0A0B4J245 112 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 TINCRA0A1B0GVN0 87 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 TCL1BO95988 128 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 ZNRF2Q8NHG8 242 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 NRGNQ92686 78 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 FAM236DA0A1B0GTK5 79 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 FAM236CP0DP71 79 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 CEP295Q9C0D2 2601 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 FAM240AA0A1B0GVK7 77 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 U3KQE9 123 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 DEFB136Q30KP8 78 aa10.24□□□□□ -0.77
PTPRK-204ENST00000368210 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
PTPRK-204ENST00000368210 C1orf229Q6ZS94 237 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-204ENST00000368210 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
PTPRK-204ENST00000368210 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
PTPRK-204ENST00000368210 EIF4EBP1Q13541 118 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms