RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 MTURNQ8N3F0 131 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 C9orf85Q96MD7 179 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 MRPL16Q9NX20 251 aaKnown RBP18.28■□□□□ 0.52
CPNE1-202ENST00000352393 TSSC4Q9Y5U2 329 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-202ENST00000352393 TRBV27A0A0K0K1C4 114 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 NDUFS8O00217 210 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 EMP1P54849 157 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 ODF3Q96PU9 254 aa18.28■□□□□ 0.52
CPNE1-202ENST00000352393 SPAG8Q99932 426 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-202ENST00000352393 A0A0J9YY99 117 aa18.27■□□□□ 0.52
CPNE1-202ENST00000352393 SRSF9Q13242 221 aaKnown RBP eCLIP18.27■□□□□ 0.52
CPNE1-202ENST00000352393 WFDC12Q8WWY7 111 aa18.27■□□□□ 0.52
CPNE1-202ENST00000352393 ZNF580Q9UK33 172 aa18.27■□□□□ 0.52
CPNE1-202ENST00000352393 CELSR1Q9NYQ6 3014 aa18.27■□□□□ 0.51
CPNE1-202ENST00000352393 DEFB104AQ8WTQ1 72 aa18.26■□□□□ 0.51
CPNE1-202ENST00000352393 CCL19Q99731 98 aa18.26■□□□□ 0.51
CPNE1-202ENST00000352393 F5H697 171 aa18.26■□□□□ 0.51
CPNE1-202ENST00000352393 IGHV3-16A0A0C4DH30 117 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 TSPAN13O95857 204 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 TSPEAR-AS2P59090 65 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 SPATA25Q9BR10 227 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 IGHV4-30-2A0A087WSY4 118 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 GAGE12HA6NDE8 117 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 MSMBP08118 114 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 ZNF876PQ49A33 203 aa18.25■□□□□ 0.51
CPNE1-202ENST00000352393 TMEM95Q3KNT9 176 aa18.24■□□□□ 0.51
CPNE1-202ENST00000352393 CLEC2AQ6UVW9 174 aa18.24■□□□□ 0.51
CPNE1-202ENST00000352393 ZNRF2Q8NHG8 242 aa18.23■□□□□ 0.51
CPNE1-202ENST00000352393 DLX4Q92988 240 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-202ENST00000352393 SIGMAR1Q99720 223 aa18.23■□□□□ 0.51
CPNE1-202ENST00000352393 NCOR2Q9Y618 2525 aa18.23■□□□□ 0.51
CPNE1-202ENST00000352393 AZU1P20160 251 aa18.23■□□□□ 0.51
CPNE1-202ENST00000352393 GTSF1LQ9H1H1 148 aa18.23■□□□□ 0.51
CPNE1-202ENST00000352393 PSMB8P28062 276 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 CFAP126Q5VTH2 177 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 A0A0J9YX75 114 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 SCGB1A1P11684 91 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 UBE2D3P61077 147 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 UBE2D2P62837 147 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 FAM74A4Q5TZK3 123 aa18.22■□□□□ 0.51
CPNE1-202ENST00000352393 ZNF688P0C7X2 276 aa18.21■□□□□ 0.51
CPNE1-202ENST00000352393 AMELXQ99217 191 aa18.21■□□□□ 0.51
CPNE1-202ENST00000352393 MDFICQ9P1T7 246 aa18.21■□□□□ 0.51
CPNE1-202ENST00000352393 M0QY20 66 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 NSUN5P1Q3KNT7 163 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 SMCPP49901 116 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-202ENST00000352393 INSL3P51460 131 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 TMEM170BQ5T4T1 132 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 NDUFA11Q86Y39 141 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 SYT8Q8NBV8 401 aa18.2■□□□□ 0.5
CPNE1-202ENST00000352393 AVPP01185 164 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 IGHV3-30P01768 117 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 IGHV3-30-5P0DP03 117 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 RHOHQ15669 191 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 SLC25A29Q8N8R3 303 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 TRAV12-2A0A075B6T6 113 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 ATP5J2P56134 94 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 ZNF56Q15929 161 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 NFE4Q86UQ8 179 aa18.19■□□□□ 0.5
CPNE1-202ENST00000352393 ZNF256Q9Y2P7 627 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-202ENST00000352393 ITPR1Q14643 2758 aa18.18■□□□□ 0.5
CPNE1-202ENST00000352393 APOMO95445 188 aa18.18■□□□□ 0.5
CPNE1-202ENST00000352393 Q8N1Y9 231 aa18.18■□□□□ 0.5
CPNE1-202ENST00000352393 ATP6V0E2Q8NHE4 81 aa18.18■□□□□ 0.5
CPNE1-202ENST00000352393 C1QTNF4Q9BXJ3 329 aa18.17■□□□□ 0.5
CPNE1-202ENST00000352393 K7EQG2 157 aa18.17■□□□□ 0.5
CPNE1-202ENST00000352393 VPS13CQ709C8 3753 aa18.17■□□□□ 0.5
CPNE1-202ENST00000352393 J3QQQ9 107 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 IGHV1OR15-1A0A075B7D0 117 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 LOC107984156A0A0G2JMH3 177 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 IGKV3-20P01619 116 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 SNRPD3P62318 126 aaKnown RBP18.16■□□□□ 0.5
CPNE1-202ENST00000352393 SMAGPQ0VAQ4 97 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 TRPT1Q86TN4 253 aaKnown RBP18.16■□□□□ 0.5
CPNE1-202ENST00000352393 ARL17AQ8IVW1 177 aa18.16■□□□□ 0.5
CPNE1-202ENST00000352393 LYRM7Q5U5X0 104 aa18.15■□□□□ 0.5
CPNE1-202ENST00000352393 C10orf99Q6UWK7 81 aa18.15■□□□□ 0.5
CPNE1-202ENST00000352393 PSMB2P49721 201 aa18.14■□□□□ 0.5
CPNE1-202ENST00000352393 CFC1BP0CG36 223 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 CFC1P0CG37 223 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 P0DMU3 169 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 FAM231AP0DMU4 169 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 FAM231CP0DMU5 169 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 SFTA2Q6UW10 78 aa18.14■□□□□ 0.49
CPNE1-202ENST00000352393 TMEM89A2RUT3 159 aa18.13■□□□□ 0.49
CPNE1-202ENST00000352393 OPRPNQ99935 248 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-202ENST00000352393 LGALS3P17931 250 aaKnown RBP18.13■□□□□ 0.49
CPNE1-202ENST00000352393 FOXI1Q12951 378 aa18.13■□□□□ 0.49
CPNE1-202ENST00000352393 SPINK13Q1W4C9 94 aa18.13■□□□□ 0.49
CPNE1-202ENST00000352393 TMEM223A0PJW6 202 aa18.12■□□□□ 0.49
CPNE1-202ENST00000352393 B4DSR2 109 aa18.12■□□□□ 0.49
CPNE1-202ENST00000352393 IGHV4-59P01825 116 aa18.12■□□□□ 0.49
CPNE1-202ENST00000352393 C20orf203Q8NBC4 194 aa18.11■□□□□ 0.49
CPNE1-202ENST00000352393 LEPROTO15243 131 aa18.11■□□□□ 0.49
CPNE1-202ENST00000352393 C10orf126Q8N4M7 172 aa18.11■□□□□ 0.49
CPNE1-202ENST00000352393 RNF152Q8N8N0 203 aa18.1■□□□□ 0.49
CPNE1-202ENST00000352393 TCL1BO95988 128 aa18.09■□□□□ 0.49
CPNE1-202ENST00000352393 DEFB112Q30KQ8 113 aa18.09■□□□□ 0.49
CPNE1-202ENST00000352393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.09■□□□□ 0.498e-8■■■■□ 20.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms