RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 GCN1Q92616 2671 aaKnown RBP13.4□□□□□ -0.26
HDAC10-202ENST00000349505 TRAV2A0A0B4J234 112 aa13.4□□□□□ -0.27
HDAC10-202ENST00000349505 TRAV12-1A0A0B4J245 112 aa13.4□□□□□ -0.27
HDAC10-202ENST00000349505 LINC01549A6NIU2 74 aa13.4□□□□□ -0.27
HDAC10-202ENST00000349505 FXYD7P58549 80 aa13.4□□□□□ -0.27
HDAC10-202ENST00000349505 C20orf78Q9BR46 151 aa13.4□□□□□ -0.27
HDAC10-202ENST00000349505 ANK3Q12955 4377 aaKnown RBP13.39□□□□□ -0.27
HDAC10-202ENST00000349505 DUSP14O95147 198 aaKnown RBP13.39□□□□□ -0.27
HDAC10-202ENST00000349505 FOXI2Q6ZQN5 318 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 PCP2Q8IVA1 136 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 C16orf95Q9H693 158 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 ACANP16112 2415 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 A0A087WX48 190 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 M0R381 172 aa13.38□□□□□ -0.27
HDAC10-202ENST00000349505 DLX4Q92988 240 aaPredicted RBP13.38□□□□□ -0.27
HDAC10-202ENST00000349505 FABP2P12104 132 aa13.37□□□□□ -0.27
HDAC10-202ENST00000349505 FAM159AQ6UWV7 190 aa13.37□□□□□ -0.27
HDAC10-202ENST00000349505 PHLDA3Q9Y5J5 127 aa13.37□□□□□ -0.27
HDAC10-202ENST00000349505 A0A1W2PPM0 123 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
HDAC10-202ENST00000349505 H3BUT2 72 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 ERASQ7Z444 233 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 ZNF418Q8TF45 676 aaPredicted RBP13.36□□□□□ -0.27
HDAC10-202ENST00000349505 DUX3Q96PT4 197 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 SMIM2Q9BVW6 85 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 TM2D2Q9BX73 214 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 RNASE3P12724 160 aaKnown RBP13.36□□□□□ -0.27
HDAC10-202ENST00000349505 CHAC1Q9BUX1 264 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 DPH3P1Q9H4G8 78 aa13.36□□□□□ -0.27
HDAC10-202ENST00000349505 GNRH2O43555 120 aa13.35□□□□□ -0.27
HDAC10-202ENST00000349505 ZC2HC1BQ5TFG8 222 aa13.35□□□□□ -0.27
HDAC10-202ENST00000349505 VPS25Q9BRG1 176 aa13.35□□□□□ -0.27
HDAC10-202ENST00000349505 H7C1H1 209 aa13.34□□□□□ -0.27
HDAC10-202ENST00000349505 HILS1P60008 231 aa13.34□□□□□ -0.27
HDAC10-202ENST00000349505 FHL3Q13643 280 aa13.34□□□□□ -0.27
HDAC10-202ENST00000349505 LINC01006Q8NI28 216 aa13.34□□□□□ -0.27
HDAC10-202ENST00000349505 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
HDAC10-202ENST00000349505 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
HDAC10-202ENST00000349505 TRBV25-1A0A075B6N4 114 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 NXPH4O95158 308 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 GAS8-AS1O95177 125 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 GATA1P15976 413 aaPredicted RBP13.33□□□□□ -0.28
HDAC10-202ENST00000349505 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 RAX2Q96IS3 184 aa13.33□□□□□ -0.28
HDAC10-202ENST00000349505 CD28P10747 220 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 COTL1Q14019 142 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 SAMD5Q5TGI4 173 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 CEND1Q8N111 149 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 SPCS1Q9Y6A9 102 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 F8VRH5 84 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 GCSHP23434 173 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 SUMO2P61956 95 aaKnown RBP13.32□□□□□ -0.28
HDAC10-202ENST00000349505 DEFB114Q30KQ6 69 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 TOMM6Q96B49 74 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
HDAC10-202ENST00000349505 TSSC4Q9Y5U2 329 aaPredicted RBP13.32□□□□□ -0.28
HDAC10-202ENST00000349505 NF1P21359 2839 aa13.32□□□□□ -0.28
HDAC10-202ENST00000349505 A8MTW9 85 aa13.31□□□□□ -0.28
HDAC10-202ENST00000349505 RPL32P62910 135 aaKnown RBP13.31□□□□□ -0.28
HDAC10-202ENST00000349505 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
HDAC10-202ENST00000349505 DEFB131AP59861 70 aa13.31□□□□□ -0.28
HDAC10-202ENST00000349505 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
HDAC10-202ENST00000349505 JMJD8Q96S16 334 aa13.31□□□□□ -0.28
HDAC10-202ENST00000349505 CUBNO60494 3623 aa13.3□□□□□ -0.28
HDAC10-202ENST00000349505 CCL24O00175 119 aa13.3□□□□□ -0.28
HDAC10-202ENST00000349505 CD7P09564 240 aa13.3□□□□□ -0.28
HDAC10-202ENST00000349505 SPINK13Q1W4C9 94 aa13.3□□□□□ -0.28
HDAC10-202ENST00000349505 POM121L12Q8N7R1 296 aa13.3□□□□□ -0.28
HDAC10-202ENST00000349505 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 HIST2H2BDQ6DRA6 164 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 C11orf44Q8N8P7 122 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 SPAG8Q99932 426 aaPredicted RBP13.29□□□□□ -0.28
HDAC10-202ENST00000349505 HECTD1Q9ULT8 2610 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 MTORP42345 2549 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 TRAV26-2A0A0B4J265 109 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 SCGB3A1Q96QR1 104 aa13.29□□□□□ -0.28
HDAC10-202ENST00000349505 CITED2Q99967 270 aaPredicted RBP13.29□□□□□ -0.28
HDAC10-202ENST00000349505 AGRNO00468 2067 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 IGHV1OR15-1A0A075B7D0 117 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 NDUFA7O95182 113 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 PAPPA-AS1Q5QFB9 102 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 NEGR1Q7Z3B1 354 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 RAB37Q96AX2 223 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 SMR3AQ99954 134 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 SORL1Q92673 2214 aa13.28□□□□□ -0.28
HDAC10-202ENST00000349505 A0A1W2PRX2 142 aa13.27□□□□□ -0.28
HDAC10-202ENST00000349505 H3BMM0 161 aa13.27□□□□□ -0.28
HDAC10-202ENST00000349505 SPRY2O43597 315 aa13.27□□□□□ -0.28
HDAC10-202ENST00000349505 CD300EQ496F6 205 aaPredicted RBP13.27□□□□□ -0.28
HDAC10-202ENST00000349505 C14orf178Q8N769 122 aaPredicted RBP13.27□□□□□ -0.28
HDAC10-202ENST00000349505 CHTOPQ9Y3Y2 248 aaKnown RBP13.27□□□□□ -0.28
HDAC10-202ENST00000349505 IGHV3-16A0A0C4DH30 117 aa13.27□□□□□ -0.29
HDAC10-202ENST00000349505 KNCNA6PVL3 124 aa13.27□□□□□ -0.29
HDAC10-202ENST00000349505 FXYD2P54710 66 aa13.27□□□□□ -0.29
HDAC10-202ENST00000349505 C9orf85Q96MD7 179 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms