RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CCL25O15444 150 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 Q6ZSR3 168 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 TMEM61Q8N0U2 210 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 C11orf86A6NJI1 115 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 HIGD2BQ4VC39 106 aa17.73■□□□□ 0.43
NPAS3-201ENST00000346562 LINC01620Q4KN68 170 aa17.72■□□□□ 0.43
NPAS3-201ENST00000346562 PROP1O75360 226 aa17.71■□□□□ 0.43
NPAS3-201ENST00000346562 LOXL1Q08397 574 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-201ENST00000346562 DAND5Q8N907 189 aa17.71■□□□□ 0.42
NPAS3-201ENST00000346562 SEC61GP60059 68 aa17.7■□□□□ 0.42
NPAS3-201ENST00000346562 MAP6D1Q9H9H5 199 aa17.7■□□□□ 0.42
NPAS3-201ENST00000346562 IGLV1-47P01700 117 aa17.69■□□□□ 0.42
NPAS3-201ENST00000346562 KIAA2026Q5HYC2 2103 aa17.69■□□□□ 0.42
NPAS3-201ENST00000346562 EP300Q09472 2414 aaPredicted RBP17.69■□□□□ 0.42
NPAS3-201ENST00000346562 ATOX1O00244 68 aa17.69■□□□□ 0.42
NPAS3-201ENST00000346562 FBXL19-AS1Q494R0 122 aa17.69■□□□□ 0.42
NPAS3-201ENST00000346562 H0Y9J4 135 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 RNF183Q96D59 192 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 A0A0J9YX75 114 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 TRBV6-1A0A0K0K1D8 114 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 LECT2O14960 151 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 DEFB125Q8N687 156 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 MED12Q93074 2177 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 IGKV3D-7A0A0C4DH55 119 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 COX7BP24311 80 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 CTRLP40313 264 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 RLFQ13129 1914 aa17.68■□□□□ 0.42
NPAS3-201ENST00000346562 TRBV10-1A0A0K0K1A3 114 aa17.67■□□□□ 0.42
NPAS3-201ENST00000346562 SMIM20Q8N5G0 67 aa17.67■□□□□ 0.42
NPAS3-201ENST00000346562 ARFGEF3Q5TH69 2177 aa17.67■□□□□ 0.42
NPAS3-201ENST00000346562 LGALS9O00182 355 aa17.66■□□□□ 0.42
NPAS3-201ENST00000346562 FAM167A-AS1Q96KT0 104 aa17.66■□□□□ 0.42
NPAS3-201ENST00000346562 TMEM256-PLSCR3K7ERE1 68 aa17.66■□□□□ 0.42
NPAS3-201ENST00000346562 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 IGHV1-58A0A0C4DH39 117 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 E9PLD3 99 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 MIR7-3HGQ8N6C7 128 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 PI4KAP42356 2102 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 TNFRSF13BO14836 293 aaPredicted RBP17.65■□□□□ 0.42
NPAS3-201ENST00000346562 GTSF1Q8WW33 167 aa17.65■□□□□ 0.42
NPAS3-201ENST00000346562 HILS1P60008 231 aa17.64■□□□□ 0.42
NPAS3-201ENST00000346562 ODF3L1Q8IXM7 274 aa17.64■□□□□ 0.41
NPAS3-201ENST00000346562 HIGD1BQ9P298 99 aa17.64■□□□□ 0.41
NPAS3-201ENST00000346562 AKAP6Q13023 2319 aa17.64■□□□□ 0.41
NPAS3-201ENST00000346562 NLRC5Q86WI3 1866 aa17.63■□□□□ 0.41
NPAS3-201ENST00000346562 NUP210Q8TEM1 1887 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-201ENST00000346562 TRBV12-3P01733 135 aa17.63■□□□□ 0.41
NPAS3-201ENST00000346562 PRB2P02812 416 aaPredicted RBP17.63■□□□□ 0.41
NPAS3-201ENST00000346562 KIR2DL5BQ8NHK3 375 aa17.63■□□□□ 0.41
NPAS3-201ENST00000346562 PDE6GP18545 87 aa17.63■□□□□ 0.41
NPAS3-201ENST00000346562 ANKRD39Q53RE8 183 aa17.63■□□□□ 0.41
NPAS3-201ENST00000346562 UNQ9165/PRO28630Q6UXU0 137 aa17.62■□□□□ 0.41
NPAS3-201ENST00000346562 MDFICQ9P1T7 246 aa17.62■□□□□ 0.41
NPAS3-201ENST00000346562 LINC00173Q6ZV60 143 aa17.62■□□□□ 0.41
NPAS3-201ENST00000346562 CEP250Q9BV73 2442 aa17.61■□□□□ 0.41
NPAS3-201ENST00000346562 LYRM9A8MSI8 78 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 KIR2DL5BA0A0G2JN68 375 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 KIR2DL5BA0A0G2JPC4 375 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 KIR2DL5AQ8N109 375 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 PRORYQ9H606 182 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 IGKV2-24A0A0C4DH68 120 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 SMIM9A6NGZ8 99 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 UFSP1Q6NVU6 142 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 C20orf203Q8NBC4 194 aa17.6■□□□□ 0.41
NPAS3-201ENST00000346562 CACNA1BQ00975 2339 aa17.59■□□□□ 0.41
NPAS3-201ENST00000346562 HELZP42694 1942 aaKnown RBP17.59■□□□□ 0.41
NPAS3-201ENST00000346562 MYLKQ15746 1914 aa17.59■□□□□ 0.41
NPAS3-201ENST00000346562 TRAV26-1A0A087WT03 109 aa17.59■□□□□ 0.41
NPAS3-201ENST00000346562 TRBV10-2A0A0K0K1G8 114 aa17.59■□□□□ 0.41
NPAS3-201ENST00000346562 PLXND1Q9Y4D7 1925 aa17.58■□□□□ 0.41
NPAS3-201ENST00000346562 NDUFC2O95298 119 aa17.58■□□□□ 0.4
NPAS3-201ENST00000346562 ODF3Q96PU9 254 aa17.58■□□□□ 0.4
NPAS3-201ENST00000346562 TEN1Q86WV5 123 aa17.58■□□□□ 0.4
NPAS3-201ENST00000346562 SPATA25Q9BR10 227 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 DEFB1P60022 68 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 REG3AQ06141 175 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 Q6YL49 198 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 NFE4Q86UQ8 179 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 CLEC2BQ92478 149 aa17.57■□□□□ 0.4
NPAS3-201ENST00000346562 ZFAND2AQ8N6M9 145 aa17.56■□□□□ 0.4
NPAS3-201ENST00000346562 CRYGDP07320 174 aa17.56■□□□□ 0.4
NPAS3-201ENST00000346562 COA6Q5JTJ3 125 aaKnown RBP17.56■□□□□ 0.4
NPAS3-201ENST00000346562 NCKAP5O14513 1909 aa17.55■□□□□ 0.4
NPAS3-201ENST00000346562 COL6A6A6NMZ7 2263 aa17.55■□□□□ 0.4
NPAS3-201ENST00000346562 IGHV4-31P0DP07 118 aa17.55■□□□□ 0.4
NPAS3-201ENST00000346562 ODF3BA8MYP8 253 aa17.55■□□□□ 0.4
NPAS3-201ENST00000346562 H3BT86 120 aa17.55■□□□□ 0.4
NPAS3-201ENST00000346562 FAM236AA0A1B0GUQ0 79 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 FAM236BA0A1B0GV22 79 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 H7C423 109 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 IGKV4-1P06312 121 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 Q6ZUT4 128 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 LINC00269Q8N2A0 174 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 SPRY4Q9C004 299 aa17.54■□□□□ 0.4
NPAS3-201ENST00000346562 Q8NA96 180 aa17.53■□□□□ 0.4
NPAS3-201ENST00000346562 FXYD2P54710 66 aa17.53■□□□□ 0.4
NPAS3-201ENST00000346562 CCDC140Q96MF4 163 aa17.53■□□□□ 0.4
NPAS3-201ENST00000346562 E7EUB6 86 aa17.52■□□□□ 0.4
NPAS3-201ENST00000346562 A0A1W2PNU3 283 aaPredicted RBP17.52■□□□□ 0.39
NPAS3-201ENST00000346562 B5MCH6 92 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms