RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 FOXI2Q6ZQN5 318 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 OR11H1Q8NG94 326 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 C4orf3Q8WVX3 66 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 RAB37Q96AX2 223 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 FOXC2Q99958 501 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 SPCS1Q9Y6A9 102 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 KIF25-AS1Q9Y6Z4 181 aa12.93□□□□□ -0.34
DDX28-201ENST00000332395 TLN2Q9Y4G6 2542 aa12.92□□□□□ -0.34
DDX28-201ENST00000332395 TCTAP57738 103 aa12.92□□□□□ -0.34
DDX28-201ENST00000332395 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
DDX28-201ENST00000332395 TEX29Q8N6K0 151 aa12.92□□□□□ -0.34
DDX28-201ENST00000332395 ZMAT4Q9H898 229 aa12.92□□□□□ -0.34
DDX28-201ENST00000332395 LINC00315P59091 139 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 PCP2Q8IVA1 136 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 AGRNO00468 2067 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 ORMDL2Q53FV1 153 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 MYO9AB2RTY4 2548 aa12.91□□□□□ -0.34
DDX28-201ENST00000332395 PPP1R17O96001 155 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 C9orf85Q96MD7 179 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 JPT2Q9H910 190 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 NMUP48645 174 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 Q6ZSV7 163 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 Q8N1Y9 231 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
DDX28-201ENST00000332395 IGHV1OR15-1A0A075B7D0 117 aa12.89□□□□□ -0.35
DDX28-201ENST00000332395 DNAJC9-AS1A6NH13 148 aa12.89□□□□□ -0.35
DDX28-201ENST00000332395 K7EMI3 77 aa12.89□□□□□ -0.35
DDX28-201ENST00000332395 IGKCP01834 107 aa12.89□□□□□ -0.35
DDX28-201ENST00000332395 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
DDX28-201ENST00000332395 FABP2P12104 132 aa12.88□□□□□ -0.35
DDX28-201ENST00000332395 KLHL30-AS1Q8NEE0 82 aa12.88□□□□□ -0.35
DDX28-201ENST00000332395 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
DDX28-201ENST00000332395 AKAP9Q99996 3911 aa12.88□□□□□ -0.35
DDX28-201ENST00000332395 CHD6Q8TD26 2715 aa12.88□□□□□ -0.35
DDX28-201ENST00000332395 A0A087WWL8 130 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 DPM2O94777 84 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 SMIM13P0DJ93 91 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 DEFB131AP59861 70 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 HIST2H2BDQ6DRA6 164 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 DLX4Q92988 240 aaPredicted RBP12.87□□□□□ -0.35
DDX28-201ENST00000332395 SORL1Q92673 2214 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 KNCNA6PVL3 124 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.87□□□□□ -0.35
DDX28-201ENST00000332395 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 TOMM6Q96B49 74 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 HIGD1BQ9P298 99 aa12.87□□□□□ -0.35
DDX28-201ENST00000332395 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
DDX28-201ENST00000332395 SONP18583 2426 aaKnown RBP12.86□□□□□ -0.35
DDX28-201ENST00000332395 MRPL35Q9NZE8 188 aaKnown RBP12.86□□□□□ -0.35
DDX28-201ENST00000332395 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
DDX28-201ENST00000332395 PLA2G2AP14555 144 aa12.86□□□□□ -0.35
DDX28-201ENST00000332395 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
DDX28-201ENST00000332395 CCDC168Q8NDH2 2452 aa12.86□□□□□ -0.35
DDX28-201ENST00000332395 A0A087WX48 190 aa12.85□□□□□ -0.35
DDX28-201ENST00000332395 CIDEAO60543 219 aa12.85□□□□□ -0.35
DDX28-201ENST00000332395 SCGB3A1Q96QR1 104 aa12.85□□□□□ -0.35
DDX28-201ENST00000332395 F5H697 171 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 DYNLRB2Q8TF09 96 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 IGKV2D-26A0A0A0MRZ7 120 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 J3QKU1 62 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 FXYD2P54710 66 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 RPL32P62910 135 aaKnown RBP12.84□□□□□ -0.35
DDX28-201ENST00000332395 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 C2orf66Q6UXQ4 117 aa12.84□□□□□ -0.35
DDX28-201ENST00000332395 H3BMM0 161 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1A1P0DJD3 496 aaKnown RBP12.83□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1CP0DJD4 496 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 GCSHP23434 173 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1FQ15415 496 aaKnown RBP12.83□□□□□ -0.36
DDX28-201ENST00000332395 PDZD2O15018 2839 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 A8MTW9 85 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 KRTAP1-1Q07627 177 aa12.83□□□□□ -0.36
DDX28-201ENST00000332395 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
DDX28-201ENST00000332395 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
DDX28-201ENST00000332395 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 PHLDA1Q8WV24 401 aaPredicted RBP12.81□□□□□ -0.36
DDX28-201ENST00000332395 CHAC1Q9BUX1 264 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 TEX48A0A1B0GUV7 120 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1BA6NDE4 496 aaKnown RBP12.81□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1EA6NEQ0 496 aaKnown RBP12.81□□□□□ -0.36
DDX28-201ENST00000332395 CRYGDP07320 174 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 RBMY1DP0C7P1 496 aaKnown RBP12.81□□□□□ -0.36
DDX28-201ENST00000332395 PLNP26678 52 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 RPL24P83731 157 aaKnown RBP12.81□□□□□ -0.36
DDX28-201ENST00000332395 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
DDX28-201ENST00000332395 F8VRH5 84 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms