RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 DYNLRB2Q8TF09 96 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 FOXC2Q99958 501 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 FASNP49327 2511 aaKnown RBP10.38□□□□□ -0.75
NXF1-201ENST00000294172 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
NXF1-201ENST00000294172 F5H697 171 aa10.37□□□□□ -0.75
NXF1-201ENST00000294172 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
NXF1-201ENST00000294172 ODF1Q14990 250 aa10.37□□□□□ -0.75
NXF1-201ENST00000294172 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
NXF1-201ENST00000294172 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
NXF1-201ENST00000294172 CBY3A6NI87 242 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 ATP5LO75964 103 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 HTN1P15515 57 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 LINC00315P59091 139 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 VAMP3Q15836 100 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 FAM74A4Q5TZK3 123 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 HECTD1Q9ULT8 2610 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 GCN1Q92616 2671 aaKnown RBP10.36□□□□□ -0.75
NXF1-201ENST00000294172 NOTCH2Q04721 2471 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 NEGR1Q7Z3B1 354 aa10.36□□□□□ -0.75
NXF1-201ENST00000294172 FGF6P10767 208 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 CSTL1Q9H114 145 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 NMUP48645 174 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 C9orf85Q96MD7 179 aa10.35□□□□□ -0.75
NXF1-201ENST00000294172 ANK3Q12955 4377 aaKnown RBP10.34□□□□□ -0.75
NXF1-201ENST00000294172 PPP1R17O96001 155 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
NXF1-201ENST00000294172 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 RAX2Q96IS3 184 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 H3BMM0 161 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
NXF1-201ENST00000294172 IGKCP01834 107 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
NXF1-201ENST00000294172 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 CD28P10747 220 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
NXF1-201ENST00000294172 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
NXF1-201ENST00000294172 NIPBLQ6KC79 2804 aaeCLIP10.33□□□□□ -0.76
NXF1-201ENST00000294172 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 TMEM160Q9NX00 188 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 DPM2O94777 84 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 MAP6D1Q9H9H5 199 aa10.33□□□□□ -0.76
NXF1-201ENST00000294172 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
NXF1-201ENST00000294172 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
NXF1-201ENST00000294172 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
NXF1-201ENST00000294172 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
NXF1-201ENST00000294172 ZNF56Q15929 161 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 PCP2Q8IVA1 136 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 OR4C5Q8NGB2 326 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 PRM2P04554 102 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
NXF1-201ENST00000294172 TRGV11A0A075B6L2 103 aa10.31□□□□□ -0.76
NXF1-201ENST00000294172 TRAV2A0A0B4J234 112 aa10.31□□□□□ -0.76
NXF1-201ENST00000294172 CCL24O00175 119 aa10.31□□□□□ -0.76
NXF1-201ENST00000294172 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
NXF1-201ENST00000294172 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
NXF1-201ENST00000294172 K7EMI3 77 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 A0A087WX48 190 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 CRYGDP07320 174 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 LINC01006Q8NI28 216 aa10.3□□□□□ -0.76
NXF1-201ENST00000294172 IGKV2D-26A0A0A0MRZ7 120 aa10.29□□□□□ -0.76
NXF1-201ENST00000294172 HIVEP2P31629 2446 aa10.29□□□□□ -0.76
NXF1-201ENST00000294172 SDHAF1A6NFY7 115 aa10.29□□□□□ -0.76
NXF1-201ENST00000294172 SEC11AP67812 179 aa10.29□□□□□ -0.76
NXF1-201ENST00000294172 VCYO14598 125 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 RNASE1P07998 156 aaKnown RBP10.28□□□□□ -0.76
NXF1-201ENST00000294172 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
NXF1-201ENST00000294172 KIR2DL4Q99706 377 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
NXF1-201ENST00000294172 SMR3AQ99954 134 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 TTTY13Q9BZ97 58 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
NXF1-201ENST00000294172 SIVA1O15304 175 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 FHL3Q13643 280 aa10.28□□□□□ -0.76
NXF1-201ENST00000294172 A8MTW9 85 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 H7C1H1 209 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 M0QY20 66 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
NXF1-201ENST00000294172 JMJD1CQ15652 2540 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 NOTCH3Q9UM47 2321 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 IGHV3-73A0A0B4J1V6 119 aa10.27□□□□□ -0.77
NXF1-201ENST00000294172 TRAV8-6A0A0B4J262 113 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms