RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 OR1N2Q8NGR9 330 aa13.91□□□□□ -0.18
PDLIM4-201ENST00000253754 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
PDLIM4-201ENST00000253754 LGALS9O00182 355 aa13.9□□□□□ -0.18
PDLIM4-201ENST00000253754 UBE2V1Q13404 147 aa13.9□□□□□ -0.18
PDLIM4-201ENST00000253754 SPINK13Q1W4C9 94 aa13.9□□□□□ -0.18
PDLIM4-201ENST00000253754 BOD1L2Q8IYS8 172 aa13.9□□□□□ -0.18
PDLIM4-201ENST00000253754 NXPH4O95158 308 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 C12orf54Q6X4T0 127 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 NEGR1Q7Z3B1 354 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 RNF152Q8N8N0 203 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 DEFB104AQ8WTQ1 72 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 ZMAT4Q9H898 229 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 HHLA3Q9XRX5 114 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 AGRNO00468 2067 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 A0A087WWL8 130 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 IGKV2D-26A0A0A0MRZ7 120 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 TCTEX1D4Q5JR98 221 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 TTTY13Q9BZ97 58 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 KIF25-AS1Q9Y6Z4 181 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 FN1P02751 2386 aaKnown RBP13.89□□□□□ -0.19
PDLIM4-201ENST00000253754 LINC00315P59091 139 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 Q6ZSV7 163 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 MDFICQ9P1T7 246 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 SORL1Q92673 2214 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 ATP5LO75964 103 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 IGKCP01834 107 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 SCGB2A2Q13296 93 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 TMEM160Q9NX00 188 aa13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 MRPL35Q9NZE8 188 aaKnown RBP13.88□□□□□ -0.19
PDLIM4-201ENST00000253754 TAX1BP3O14907 124 aa13.87□□□□□ -0.19
PDLIM4-201ENST00000253754 C20orf78Q9BR46 151 aa13.87□□□□□ -0.19
PDLIM4-201ENST00000253754 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
PDLIM4-201ENST00000253754 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
PDLIM4-201ENST00000253754 IGHV3-16A0A0C4DH30 117 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 Q8N1Y9 231 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 ODF3Q96PU9 254 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 DPM2O94777 84 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 OR11H1Q8NG94 326 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 CSTL1Q9H114 145 aa13.85□□□□□ -0.19
PDLIM4-201ENST00000253754 KNCNA6PVL3 124 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 TMEM97Q5BJF2 176 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 ZC2HC1BQ5TFG8 222 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 SUMO4Q6EEV6 95 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 POM121L12Q8N7R1 296 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 ZNF418Q8TF45 676 aaPredicted RBP13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 ORMDL2Q53FV1 153 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 FAM74A4Q5TZK3 123 aa13.84□□□□□ -0.19
PDLIM4-201ENST00000253754 CBY3A6NI87 242 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 AMTNQ6UX39 209 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 A0A087WX48 190 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 C9orf85Q96MD7 179 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 SCGB3A1Q96QR1 104 aa13.83□□□□□ -0.2
PDLIM4-201ENST00000253754 INAFM1C9JVW0 142 aa13.82□□□□□ -0.2
PDLIM4-201ENST00000253754 F5H697 171 aa13.82□□□□□ -0.2
PDLIM4-201ENST00000253754 LINC01619G3V211 115 aa13.82□□□□□ -0.2
PDLIM4-201ENST00000253754 RNASE1P07998 156 aaKnown RBP13.82□□□□□ -0.2
PDLIM4-201ENST00000253754 FOXI2Q6ZQN5 318 aa13.82□□□□□ -0.2
PDLIM4-201ENST00000253754 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1A1P0DJD3 496 aaKnown RBP13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1CP0DJD4 496 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1FQ15415 496 aaKnown RBP13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 C2orf66Q6UXQ4 117 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 DEFB131AP59861 70 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 HILS1P60008 231 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 OR9G4Q8NGQ1 327 aa13.81□□□□□ -0.2
PDLIM4-201ENST00000253754 CIDEAO60543 219 aa13.8□□□□□ -0.2
PDLIM4-201ENST00000253754 DUSP14O95147 198 aaKnown RBP13.8□□□□□ -0.2
PDLIM4-201ENST00000253754 TMEM61Q8N0U2 210 aa13.8□□□□□ -0.2
PDLIM4-201ENST00000253754 KLHL30-AS1Q8NEE0 82 aa13.8□□□□□ -0.2
PDLIM4-201ENST00000253754 DLX4Q92988 240 aaPredicted RBP13.8□□□□□ -0.2
PDLIM4-201ENST00000253754 HTN1P15515 57 aa13.79□□□□□ -0.2
PDLIM4-201ENST00000253754 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
PDLIM4-201ENST00000253754 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
PDLIM4-201ENST00000253754 PRM2P04554 102 aa13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 VAMP3Q15836 100 aa13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 RNF151Q2KHN1 245 aa13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 PPP1R17O96001 155 aa13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 NEXN-AS1Q8NBZ9 246 aa13.78□□□□□ -0.2
PDLIM4-201ENST00000253754 SIVA1O15304 175 aa13.77□□□□□ -0.21
PDLIM4-201ENST00000253754 HSD52Q0P140 79 aa13.77□□□□□ -0.21
PDLIM4-201ENST00000253754 BAALCQ8WXS3 180 aa13.77□□□□□ -0.21
PDLIM4-201ENST00000253754 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 K7EMI3 77 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 ZNF56Q15929 161 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 F8VRH5 84 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 H7C1H1 209 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 CRYGDP07320 174 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 POLR2KP53803 58 aaKnown RBP13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 OR4C5Q8NGB2 326 aa13.76□□□□□ -0.21
PDLIM4-201ENST00000253754 TRAV8-6A0A0B4J262 113 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 SDHAF1A6NFY7 115 aa13.75□□□□□ -0.21
PDLIM4-201ENST00000253754 PLNP26678 52 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms