RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 IGHG2P01859 326 aa13.84□□□□□ -0.19
CACTIN-201ENST00000221899 PMVKQ15126 192 aa13.84□□□□□ -0.19
CACTIN-201ENST00000221899 KIR2DL4Q99706 377 aa13.84□□□□□ -0.19
CACTIN-201ENST00000221899 NDUFS8O00217 210 aa13.83□□□□□ -0.19
CACTIN-201ENST00000221899 NXPH4O95158 308 aa13.83□□□□□ -0.19
CACTIN-201ENST00000221899 SMCPP49901 116 aaPredicted RBP13.83□□□□□ -0.19
CACTIN-201ENST00000221899 UBE2D1P51668 147 aa13.83□□□□□ -0.19
CACTIN-201ENST00000221899 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.19
CACTIN-201ENST00000221899 TMEM95Q3KNT9 176 aa13.83□□□□□ -0.19
CACTIN-201ENST00000221899 TRAV12-2A0A075B6T6 113 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 KLLNB2CW77 178 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 TGFAP01135 160 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 HERVK_113P61574 105 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 CLEC2AQ6UVW9 174 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 POM121L12Q8N7R1 296 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 DLX4Q92988 240 aaPredicted RBP13.83□□□□□ -0.2
CACTIN-201ENST00000221899 A0A0J9YY99 117 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 OPRPNQ99935 248 aaPredicted RBP13.83□□□□□ -0.2
CACTIN-201ENST00000221899 SPATA25Q9BR10 227 aa13.83□□□□□ -0.2
CACTIN-201ENST00000221899 CHD8Q9HCK8 2581 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 IGHV4OR15-8A0A075B7B6 117 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 A0A087WW49 117 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 CFAP126Q5VTH2 177 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 PTH2Q96A98 100 aa13.82□□□□□ -0.2
CACTIN-201ENST00000221899 VCYO14598 125 aa13.81□□□□□ -0.2
CACTIN-201ENST00000221899 ZNF688P0C7X2 276 aa13.81□□□□□ -0.2
CACTIN-201ENST00000221899 MDFICQ9P1T7 246 aa13.81□□□□□ -0.2
CACTIN-201ENST00000221899 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.22e-8■■■■■ 31.6
CACTIN-201ENST00000221899 ZNF56Q15929 161 aa13.8□□□□□ -0.2
CACTIN-201ENST00000221899 NDUFA11Q86Y39 141 aa13.8□□□□□ -0.2
CACTIN-201ENST00000221899 SPG11Q96JI7 2443 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 SPTBN4Q9H254 2564 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 A6NDX4 124 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 NFE4Q86UQ8 179 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 DCANP1Q8TF63 244 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 TRBV7-9A0A0J9YWB2 115 aa13.79□□□□□ -0.2
CACTIN-201ENST00000221899 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 H3BUA1 57 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 ID1P41134 155 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 FOXI1Q12951 378 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 PAPPA-AS1Q5QFB9 102 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 C1QTNF4Q9BXJ3 329 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 TMEM141Q96I45 108 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 CRYBG3Q68DQ2 2970 aa13.78□□□□□ -0.2
CACTIN-201ENST00000221899 C10orf99Q6UWK7 81 aa13.77□□□□□ -0.2
CACTIN-201ENST00000221899 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.2
CACTIN-201ENST00000221899 IGLV1-40P01703 118 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 CFC1BP0CG36 223 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 CFC1P0CG37 223 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 RPL32P62910 135 aaKnown RBP13.77□□□□□ -0.21
CACTIN-201ENST00000221899 TIMM17AQ99595 171 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 IGHV3-30P01768 117 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 IGHV3-30-5P0DP03 117 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 UBE2D3P61077 147 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 UBE2D2P62837 147 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 SYT8Q8NBV8 401 aa13.77□□□□□ -0.21
CACTIN-201ENST00000221899 TCL1BO95988 128 aa13.76□□□□□ -0.21
CACTIN-201ENST00000221899 SCGB1A1P11684 91 aa13.76□□□□□ -0.21
CACTIN-201ENST00000221899 ZNF876PQ49A33 203 aa13.76□□□□□ -0.21
CACTIN-201ENST00000221899 SORL1Q92673 2214 aa13.76□□□□□ -0.21
CACTIN-201ENST00000221899 J3QQQ9 107 aa13.76□□□□□ -0.21
CACTIN-201ENST00000221899 IGHV3-16A0A0C4DH30 117 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 TRBV27A0A0K0K1C4 114 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
CACTIN-201ENST00000221899 GNLYP22749 145 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 Q8N1Y9 231 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 CSPG4Q6UVK1 2322 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 LGALS9O00182 355 aa13.75□□□□□ -0.21
CACTIN-201ENST00000221899 CELSR2Q9HCU4 2923 aa13.74□□□□□ -0.21
CACTIN-201ENST00000221899 SPINK13Q1W4C9 94 aa13.74□□□□□ -0.21
CACTIN-201ENST00000221899 SLC25A29Q8N8R3 303 aa13.74□□□□□ -0.21
CACTIN-201ENST00000221899 AMELXQ99217 191 aa13.74□□□□□ -0.21
CACTIN-201ENST00000221899 M0QY20 66 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 IGHV4-30-2A0A087WSY4 118 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 BRI3O95415 125 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 SCGB1C2P0DMR2 95 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 FHL3Q13643 280 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 C9orf85Q96MD7 179 aa13.73□□□□□ -0.21
CACTIN-201ENST00000221899 CIDEAO60543 219 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 AVPP01185 164 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 C10orf105Q8TEF2 133 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 RAX2Q96IS3 184 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 H7C2G1 150 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 CCL19Q99731 98 aa13.72□□□□□ -0.21
CACTIN-201ENST00000221899 C10orf126Q8N4M7 172 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 P0DMU3 169 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 FAM231AP0DMU4 169 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 FAM231CP0DMU5 169 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 CFHR3Q02985 330 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 CDIP1Q9H305 208 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
CACTIN-201ENST00000221899 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.22
CACTIN-201ENST00000221899 K7EMT4 169 aa13.71□□□□□ -0.22
CACTIN-201ENST00000221899 CARD19Q96LW7 228 aa13.71□□□□□ -0.22
CACTIN-201ENST00000221899 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 ITPR1Q14643 2758 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 A0A0J9YX75 114 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 HTN1P15515 57 aa13.7□□□□□ -0.22
CACTIN-201ENST00000221899 ATP6V0E2Q8NHE4 81 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms