RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Rtn4rQ99PI8 473 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Heatr5aQ5PRF0 2038 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trav16A0A075B653 116 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm42543A0A0G2JET4 117 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm21882J3QN86 361 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ucp2P70406 309 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 SeleQ00690 612 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 GalmQ8K157 342 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tctn3Q8R2Q6 595 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trip12G5E870 2025 aaKnown RBP10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Zfp707F6QUN2 391 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Hint1P70349 126 aaKnown RBP10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm10283Q8C3L5 117 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 4930447A16RikQ9D5F6 132 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Nhsl1Q8CAF4 1587 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trav3n-3A0A0G2JEM0 114 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01822 137 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 AmtnQ9D3J8 213 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Med13Q5SWW4 2171 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ighv1-54A0A075B5W5 117 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm11444F6QMA6 170 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Bdp1Q571C7 2467 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Igsf23B2RTN2 239 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Loxl2P58022 776 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Treml4Q3LRV9 263 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Slc25a16Q8C0K5 332 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 ChtopQ9CY57 249 aaKnown RBP10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm17660B9UIU9 90 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01661 131 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01662 111 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01663 111 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Adrb3P25962 400 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Lyl1P27792 278 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tac4Q99N14 128 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Znhit3Q9CQK1 151 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Wrap73Q9JM98 462 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Siglec12Q91Y57 467 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 St6galnac6Q9JM95 333 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 9830107B12RikD3Z5D6 160 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Faap20Q3UN58 186 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Vmn1r70Q8R254 298 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tmem126aQ9D8Y1 196 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 C2cd4dP0CG09 341 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Acsm5Q8BGA8 578 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Smim8Q9CQQ0 97 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr918E9PVZ7 325 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Sfta2E9PXB6 77 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ccl2P10148 148 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ssbp4Q3U4B1 363 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 SnrpcQ62241 159 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ros1Q78DX7 2340 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr975Q8VG91 310 aa10.17□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm45521A0A1B0GRK0 198 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm45785A0A1B0GT05 94 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm21731A0A286YDE9 180 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 DdtO35215 118 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Foxa3P35584 353 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Rspo2Q8BFU0 243 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 PpifQ99KR7 206 aaKnown RBP10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 4930412O13RikQ9D5M9 106 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trbv19A0A0B4J1H4 117 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tmem129Q8K304 362 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Col4a1P02463 1669 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm45844A0A1B0GRQ2 137 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Lrp10Q7TQH7 713 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tmem177Q8BPE4 311 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Frem1Q684R7 2191 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ntn1O09118 604 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm9945Q8BNZ3 91 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr749E9Q438 313 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Psg27Q497W2 474 aa10.16□□□□□ -0.78
Trim56-201ENSMUST00000054384 Spint5J3KMK8 105 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Snrnp40Q6PE01 358 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 H2al3Q9D4U4 128 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Q9DAS2 200 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 FancmQ8BGE5 2021 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 H3BKT1 185 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Mfap4Q9D1H9 257 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Hcfc2Q9D968 241 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Cacna1gQ5SUF7 2381 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Fgf11P70378 225 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Znf431E9QAG8 526 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 GalnsQ571E4 520 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr968Q8VFN4 314 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Rasl11aQ6IMB1 242 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 HilpdaQ9JLS0 64 aa10.15□□□□□ -0.78
Trim56-201ENSMUST00000054384 Slc25a53A2AF28 346 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Olfr1381Q7TQT4 311 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ubald2Q8BQH4 164 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Cox19Q8K0C8 92 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prss41Q920S2 322 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Scn10aQ6QIY3 1958 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Ighv7-3A0A075B5R2 120 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Iqcf6G3UWF2 157 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Gm10665K7N6B7 321 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Wdr31Q9JHB4 367 aa10.15□□□□□ -0.79
Trim56-201ENSMUST00000054384 Prss30Q9QYZ9 310 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav16nA0A075B634 117 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Irf2bp2E9Q1P8 570 aa10.14□□□□□ -0.79
Trim56-201ENSMUST00000054384 Trav13n-4A0A0G2JG01 110 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 100.4 ms