RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 UBE2V1Q13404 147 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 ADAMTSL5Q6ZMM2 481 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 MRAP2Q96G30 205 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 CCL25O15444 150 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 LEPP41159 167 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 PCP4P48539 62 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 SLURP1P55000 103 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 DEFB136Q30KP8 78 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 TCTEX1D4Q5JR98 221 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 Q8N8P6 123 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 C4orf3Q8WVX3 66 aa14.73□□□□□ -0.05
PCDHB11-202ENST00000624887 UNC79Q9P2D8 2635 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 TLN2Q9Y4G6 2542 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 IGLV2-18A0A075B6J9 118 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 TRAV26-2A0A0B4J265 109 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 hDV102S1A0JD36 115 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 LINC01619G3V211 115 aa14.72□□□□□ -0.05
PCDHB11-202ENST00000624887 PTTG1IPP53801 180 aa14.71□□□□□ -0.05
PCDHB11-202ENST00000624887 KRTAP1-1Q07627 177 aa14.71□□□□□ -0.05
PCDHB11-202ENST00000624887 C7orf71A4D174 169 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 HSBP1L1C9JCN9 74 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 SPRY2O43597 315 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 FCER1GP30273 86 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 ANKRD39Q53RE8 183 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 FAM159AQ6UWV7 190 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 WFDC12Q8WWY7 111 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 PMCHL2Q9BQD1 86 aa14.71□□□□□ -0.06
PCDHB11-202ENST00000624887 DNAJC9-AS1A6NH13 148 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 CD5LO43866 347 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 Q6ZSV7 163 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 OR11H1Q8NG94 326 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 IFI27L1Q96BM0 104 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 DPH3P1Q9H4G8 78 aa14.7□□□□□ -0.06
PCDHB11-202ENST00000624887 NXPH4O95158 308 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 RBX1P62877 108 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 LGALS9BQ3B8N2 356 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 LGALS9CQ6DKI2 356 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 AKAP9Q99996 3911 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 TRAV12-3A0A0B4J271 114 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 MYO9AB2RTY4 2548 aa14.69□□□□□ -0.06
PCDHB11-202ENST00000624887 FLNAP21333 2647 aaKnown RBP14.68□□□□□ -0.06
PCDHB11-202ENST00000624887 DUSP14O95147 198 aaKnown RBP14.68□□□□□ -0.06
PCDHB11-202ENST00000624887 OR1N2Q8NGR9 330 aa14.68□□□□□ -0.06
PCDHB11-202ENST00000624887 DPF1Q92782 380 aa14.68□□□□□ -0.06
PCDHB11-202ENST00000624887 CCDC168Q8NDH2 2452 aa14.68□□□□□ -0.06
PCDHB11-202ENST00000624887 ITPR2Q14571 2701 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 HINT1P49773 126 aaPredicted RBP14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 FOXI2Q6ZQN5 318 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 C14orf178Q8N769 122 aaPredicted RBP14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 PEMTQ9UBM1 199 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 IGKV3-20P01619 116 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 OR9G4Q8NGQ1 327 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 AP1S3Q96PC3 154 aa14.67□□□□□ -0.06
PCDHB11-202ENST00000624887 CDKN1BP46527 198 aa14.66□□□□□ -0.06
PCDHB11-202ENST00000624887 KHDC1LQ5JSQ8 128 aa14.66□□□□□ -0.06
PCDHB11-202ENST00000624887 KLHL30-AS1Q8NEE0 82 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 RNASE8Q8TDE3 154 aaKnown RBP14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 ESM1Q9NQ30 184 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 YAE1D1Q9NRH1 226 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 MUC4Q99102 2169 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 SONP18583 2426 aaKnown RBP14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 CD7P09564 240 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 TMEM158Q8WZ71 300 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 DUX3Q96PT4 197 aa14.65□□□□□ -0.06
PCDHB11-202ENST00000624887 TRAV12-2A0A075B6T6 113 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 TRAV2A0A0B4J234 112 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 LAGE3Q14657 143 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 POM121L12Q8N7R1 296 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 RASL10AQ92737 203 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 SPINK13Q1W4C9 94 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 AMTNQ6UX39 209 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 DLX4Q92988 240 aaPredicted RBP14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 C18orf15Q96N68 181 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 SMIM2Q9BVW6 85 aa14.64□□□□□ -0.07
PCDHB11-202ENST00000624887 AGRNO00468 2067 aa14.63□□□□□ -0.07
PCDHB11-202ENST00000624887 FASNP49327 2511 aaKnown RBP14.63□□□□□ -0.07
PCDHB11-202ENST00000624887 C20orf78Q9BR46 151 aa14.63□□□□□ -0.07
PCDHB11-202ENST00000624887 KIF25-AS1Q9Y6Z4 181 aa14.63□□□□□ -0.07
PCDHB11-202ENST00000624887 MGPP08493 103 aa14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 SLC25A34Q6PIV7 304 aa14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 IGHV3-16A0A0C4DH30 117 aa14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 SUMO2P61956 95 aaKnown RBP14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 C21orf62-AS1Q17RA5 79 aa14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 C9orf85Q96MD7 179 aa14.62□□□□□ -0.07
PCDHB11-202ENST00000624887 HECTD1Q9ULT8 2610 aa14.61□□□□□ -0.07
PCDHB11-202ENST00000624887 TMEM61Q8N0U2 210 aa14.61□□□□□ -0.07
PCDHB11-202ENST00000624887 SORL1Q92673 2214 aa14.61□□□□□ -0.07
PCDHB11-202ENST00000624887 IGHV1OR15-1A0A075B7D0 117 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 PPP1R17O96001 155 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 SMIM17P0DL12 118 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 LINC00315P59091 139 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 A8MTW9 85 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 DEFB131AP59861 70 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 RPL39LQ96EH5 51 aaKnown RBP14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 TP73-AS1Q9UF72 201 aa14.6□□□□□ -0.07
PCDHB11-202ENST00000624887 ATP5LO75964 103 aa14.59□□□□□ -0.07
PCDHB11-202ENST00000624887 Q8N1Y9 231 aa14.59□□□□□ -0.07
PCDHB11-202ENST00000624887 KNCNA6PVL3 124 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 K7EMI3 77 aa14.58□□□□□ -0.07
PCDHB11-202ENST00000624887 HLA-DRB4P13762 266 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms