RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ORMDL3Q8N138 153 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 CLUHP3Q96NS8 147 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 SMIM6P0DI80 62 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 RAB4AP20338 218 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 EVI2AP22794 236 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 CKS2P33552 79 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 RNF185Q96GF1 192 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 PRELID3AQ96N28 172 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 U3KQK5 164 aa15.8■□□□□ 0.12
SPAST-204ENST00000621856 BEAN1Q3B7T3 259 aa15.79■□□□□ 0.12
SPAST-204ENST00000621856 NIT1Q86X76 327 aa15.79■□□□□ 0.12
SPAST-204ENST00000621856 C12orf57Q99622 126 aa15.79■□□□□ 0.12
SPAST-204ENST00000621856 RBMY1A1P0DJD3 496 aaKnown RBP15.78■□□□□ 0.12
SPAST-204ENST00000621856 RBMY1CP0DJD4 496 aa15.78■□□□□ 0.12
SPAST-204ENST00000621856 PMCHP20382 165 aa15.78■□□□□ 0.12
SPAST-204ENST00000621856 RBMY1FQ15415 496 aaKnown RBP15.78■□□□□ 0.12
SPAST-204ENST00000621856 Q8N1Y9 231 aa15.78■□□□□ 0.12
SPAST-204ENST00000621856 IGHV3-16A0A0C4DH30 117 aa15.77■□□□□ 0.12
SPAST-204ENST00000621856 SMKR1H3BMG3 65 aa15.77■□□□□ 0.12
SPAST-204ENST00000621856 TRGV11A0A075B6L2 103 aa15.77■□□□□ 0.11
SPAST-204ENST00000621856 CBY3A6NI87 242 aa15.77■□□□□ 0.11
SPAST-204ENST00000621856 HSBP1O75506 76 aa15.77■□□□□ 0.11
SPAST-204ENST00000621856 NCR2O95944 276 aa15.77■□□□□ 0.11
SPAST-204ENST00000621856 AMTP48728 403 aa15.77■□□□□ 0.11
SPAST-204ENST00000621856 TRPT1Q86TN4 253 aaKnown RBP15.77■□□□□ 0.11
SPAST-204ENST00000621856 INSP01308 110 aa15.76■□□□□ 0.11
SPAST-204ENST00000621856 FAM110AQ9BQ89 295 aa15.76■□□□□ 0.11
SPAST-204ENST00000621856 PPBPP02775 128 aa15.75■□□□□ 0.11
SPAST-204ENST00000621856 C9orf66Q5T8R8 295 aa15.75■□□□□ 0.11
SPAST-204ENST00000621856 MDFICQ9P1T7 246 aa15.75■□□□□ 0.11
SPAST-204ENST00000621856 JMJD1CQ15652 2540 aa15.75■□□□□ 0.11
SPAST-204ENST00000621856 HTN1P15515 57 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 PYY3Q5JQD4 70 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 URB1-AS1Q96HZ7 61 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 C9orf85Q96MD7 179 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 AP1S3Q96PC3 154 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 NXPH4O95158 308 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 INSL3P51460 131 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 KRTAP24-1Q3LI83 254 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 FAM19A2Q8N3H0 131 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 CHCHD1Q96BP2 118 aaKnown RBP15.74■□□□□ 0.11
SPAST-204ENST00000621856 WFDC10AQ9H1F0 79 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 XCL2Q9UBD3 114 aa15.74■□□□□ 0.11
SPAST-204ENST00000621856 NPYP01303 97 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 LINC00614P0C842 121 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 NUTF2P61970 127 aaKnown RBP15.73■□□□□ 0.11
SPAST-204ENST00000621856 PRSS3P2Q8NHM4 247 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 SPATA3Q8NHX4 192 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 C20orf144Q9BQM9 153 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 DPH3P1Q9H4G8 78 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 C19orf73Q9NVV2 129 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 MUC4Q99102 2169 aa15.73■□□□□ 0.11
SPAST-204ENST00000621856 LOC389332A0A1B0GUA5 103 aa15.72■□□□□ 0.11
SPAST-204ENST00000621856 SYT8Q8NBV8 401 aa15.72■□□□□ 0.11
SPAST-204ENST00000621856 LINC01587Q99440 93 aa15.72■□□□□ 0.11
SPAST-204ENST00000621856 FA2HQ7L5A8 372 aa15.71■□□□□ 0.11
SPAST-204ENST00000621856 C14orf178Q8N769 122 aaPredicted RBP15.71■□□□□ 0.11
SPAST-204ENST00000621856 NIPBLQ6KC79 2804 aaeCLIP15.71■□□□□ 0.1
SPAST-204ENST00000621856 MGPP08493 103 aa15.7■□□□□ 0.1
SPAST-204ENST00000621856 LAMTOR2Q9Y2Q5 125 aa15.7■□□□□ 0.1
SPAST-204ENST00000621856 GAS8-AS1O95177 125 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 SMIM17P0DL12 118 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 Q6ZWC4 215 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 MRAP2Q96G30 205 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 TMEM208Q9BTX3 173 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 MAP1LC3AQ9H492 121 aa15.69■□□□□ 0.1
SPAST-204ENST00000621856 TRAV26-2A0A0B4J265 109 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 TNFRSF6BO95407 300 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 GATA1P15976 413 aaPredicted RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 RPL35AP18077 110 aaKnown RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 IFI27P40305 119 aaPredicted RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 JOSD1Q15040 202 aaPredicted RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 TEP1Q99973 2627 aaKnown RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 ZNF415Q09FC8 603 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 GTSCR1Q86UQ5 136 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 LINC00467Q9BRT7 94 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 MCRIP2Q9BUT9 160 aaKnown RBP15.68■□□□□ 0.1
SPAST-204ENST00000621856 NIT2Q9NQR4 276 aa15.68■□□□□ 0.1
SPAST-204ENST00000621856 PMCHL1Q16048 86 aa15.67■□□□□ 0.1
SPAST-204ENST00000621856 AP5S1Q9NUS5 200 aa15.67■□□□□ 0.1
SPAST-204ENST00000621856 ATRQ13535 2644 aa15.67■□□□□ 0.1
SPAST-204ENST00000621856 IGHV1-24A0A0C4DH33 117 aa15.66■□□□□ 0.1
SPAST-204ENST00000621856 PRM2P04554 102 aa15.66■□□□□ 0.1
SPAST-204ENST00000621856 JPT2Q9H910 190 aa15.66■□□□□ 0.1
SPAST-204ENST00000621856 TENM1Q9UKZ4 2725 aa15.66■□□□□ 0.1
SPAST-204ENST00000621856 IGHV3OR16-12A0A075B7B8 117 aa15.65■□□□□ 0.1
SPAST-204ENST00000621856 DEFB125Q8N687 156 aa15.65■□□□□ 0.1
SPAST-204ENST00000621856 ZNF876PQ49A33 203 aa15.65■□□□□ 0.1
SPAST-204ENST00000621856 C1orf158Q8N1D5 194 aa15.65■□□□□ 0.1
SPAST-204ENST00000621856 ZNF747Q9BV97 191 aa15.65■□□□□ 0.1
SPAST-204ENST00000621856 KRTDAPP60985 99 aa15.64■□□□□ 0.09
SPAST-204ENST00000621856 NRACQ8N912 160 aa15.64■□□□□ 0.09
SPAST-204ENST00000621856 KIF25-AS1Q9Y6Z4 181 aa15.64■□□□□ 0.09
SPAST-204ENST00000621856 A0A087WWL8 130 aa15.63■□□□□ 0.09
SPAST-204ENST00000621856 SCGB1D1O95968 90 aa15.63■□□□□ 0.09
SPAST-204ENST00000621856 CDPF1Q6NVV7 123 aa15.63■□□□□ 0.09
SPAST-204ENST00000621856 MORN3Q6PF18 240 aaPredicted RBP15.63■□□□□ 0.09
SPAST-204ENST00000621856 GSN-AS1Q9NRJ2 163 aa15.63■□□□□ 0.09
SPAST-204ENST00000621856 PRIMA1Q86XR5 153 aa15.63■□□□□ 0.09
SPAST-204ENST00000621856 C3orf56Q8N813 242 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms