RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
CDH1-213ENST00000612417 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
CDH1-213ENST00000612417 HOXA3O43365 443 aaPredicted RBP11.13□□□□□ -0.63
CDH1-213ENST00000612417 PF4V1P10720 104 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 ACANP16112 2415 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 HSD52Q0P140 79 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 PRR9Q5T870 116 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
CDH1-213ENST00000612417 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
CDH1-213ENST00000612417 OVOL1O14753 267 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 TRBV12-3P01733 135 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 ADAMTSL5Q6ZMM2 481 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 WFDC3Q8IUB2 231 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 MTURNQ8N3F0 131 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 ZFAND2AQ8N6M9 145 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 HHLA3Q9XRX5 114 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 C7orf71A4D174 169 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 ATP5LO75964 103 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 Q6ZQT7 251 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
CDH1-213ENST00000612417 KIR3DS1Q14943 382 aa11.11□□□□□ -0.63
CDH1-213ENST00000612417 DUX5Q96PT3 197 aa11.11□□□□□ -0.63
CDH1-213ENST00000612417 UFC1Q9Y3C8 167 aa11.11□□□□□ -0.63
CDH1-213ENST00000612417 GAGE12BA1L429 117 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 A6NDN8 102 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 H3BVH4 76 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 LAGE3Q14657 143 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 YAE1D1Q9NRH1 226 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 TRBV7-9A0A0J9YWB2 115 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 NMUP48645 174 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 LCNL1Q6ZST4 164 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 ERASQ7Z444 233 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 APRG1Q8IVJ8 170 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
CDH1-213ENST00000612417 TRAV8-6A0A0B4J262 113 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 IGKCP01834 107 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 PRSS1P07477 247 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 MED14OSP0DP75 135 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 AMMECR1LQ6DCA0 310 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 NOTCH2Q04721 2471 aa11.09□□□□□ -0.63
CDH1-213ENST00000612417 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 H3BRM9 83 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 IGLV1-40P01703 118 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 HLA-DRB4P13762 266 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 HIGD1BQ9P298 99 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.63
CDH1-213ENST00000612417 DPM2O94777 84 aa11.08□□□□□ -0.64
CDH1-213ENST00000612417 CRYBA4P53673 196 aa11.08□□□□□ -0.64
CDH1-213ENST00000612417 A0A0G2JLM5 398 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 TCTAP57738 103 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 CFHR3Q02985 330 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 ZNF580Q9UK33 172 aa11.07□□□□□ -0.64
CDH1-213ENST00000612417 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
CDH1-213ENST00000612417 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
CDH1-213ENST00000612417 ASIPP42127 132 aa11.06□□□□□ -0.64
CDH1-213ENST00000612417 K7EMI3 77 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 KRTAP1-1Q07627 177 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 DPH3P1Q9H4G8 78 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 ZNF702PQ9H963 129 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
CDH1-213ENST00000612417 TCTEX1D4Q5JR98 221 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 C10orf99Q6UWK7 81 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 RHPN1-AS1Q9BWJ2 59 aa11.05□□□□□ -0.64
CDH1-213ENST00000612417 TRAV26-1A0A087WT03 109 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 A0A087WX48 190 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 M0R381 172 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 S100A4P26447 101 aaKnown RBP11.04□□□□□ -0.64
CDH1-213ENST00000612417 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
CDH1-213ENST00000612417 ORMDL2Q53FV1 153 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 RASL10AQ92737 203 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 MRPL35Q9NZE8 188 aaKnown RBP11.04□□□□□ -0.64
CDH1-213ENST00000612417 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
CDH1-213ENST00000612417 TRAV12-1A0A0B4J245 112 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 K7EMT4 169 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 NXPH4O95158 308 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 PLNP26678 52 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 PSMB8P28062 276 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 CKS1BP61024 79 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
CDH1-213ENST00000612417 SAP30O75446 220 aa11.02□□□□□ -0.64
CDH1-213ENST00000612417 DEFB1P60022 68 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms