RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 NHLRC4P0CG21 123 aaPredicted RBP3.38□□□□□ -1.87
CDH8-205ENST00000577730 EDN2P20800 178 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 ESRGQ1W209 222 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 SPINK13Q1W4C9 94 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 Q6ZPA2 131 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 SCXQ7RTU7 201 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 RMI2Q96E14 147 aa3.38□□□□□ -1.87
CDH8-205ENST00000577730 SIPA1L3O60292 1781 aaPredicted RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 NDUFA4O00483 81 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 CD164Q04900 197 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 VMO1Q7Z5L0 202 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 ZNF71Q9NQZ8 489 aaPredicted RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 HIGD2BQ4VC39 106 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 TMEM89A2RUT3 159 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 NDUFB1O75438 58 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 NKAPP1Q8N9T2 125 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 NYNRINQ9P2P1 1898 aaKnown RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 A8MZ25 164 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 SLPIP03973 132 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 BRWD1-AS2P59051 145 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 EBI3Q14213 229 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 CEMP1Q6PRD7 247 aaPredicted RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 C9orf47Q6ZRZ4 202 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 DOCK1Q14185 1865 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 SAP25Q8TEE9 199 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 RNASE6Q93091 150 aaKnown RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 C7orf69Q9H7B7 122 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 RGPD3A6NKT7 1758 aaPredicted RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 RGPD4Q7Z3J3 1758 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 ZNF236Q9UL36 1845 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 NUP214P35658 2090 aaPredicted RBP3.37□□□□□ -1.87
CDH8-205ENST00000577730 A0A096LNJ9 63 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 ZNF503-AS2A6NEH8 195 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 NDUFA1O15239 70 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 ARRDC1-AS1Q9H2J1 176 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 SCN8AQ9UQD0 1980 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 ZNF831Q5JPB2 1677 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 C5orf67F2Z3F1 127 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 CCKP06307 115 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 SBSPONQ8IVN8 264 aa3.37□□□□□ -1.87
CDH8-205ENST00000577730 K7EIM0 57 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 PRYO14603 147 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 ATP6V0E1O15342 81 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 EIF4EBP1Q13541 118 aaPredicted RBP3.36□□□□□ -1.87
CDH8-205ENST00000577730 CRIP3Q6Q6R5 217 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 CASC2Q6XLA1 102 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 PSPHP1O15172 72 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 SERTAD4-AS1Q5TG53 156 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 NUMA1Q14980 2115 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 LYPD2Q6UXB3 125 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 PCM1Q15154 2024 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 SIPA1L1O43166 1804 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 SPRNQ5BIV9 151 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 PATJQ8NI35 1801 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 IGLV2-11P01706 119 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 CMC4P56277 68 aaPredicted RBP3.36□□□□□ -1.87
CDH8-205ENST00000577730 C11orf53Q8IXP5 236 aa3.36□□□□□ -1.87
CDH8-205ENST00000577730 WT1P19544 449 aaPredicted RBP3.35□□□□□ -1.87
CDH8-205ENST00000577730 Q8N7P7 452 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 ZNF561-AS1K7EIQ3 104 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 PRR4Q16378 134 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 C1orf53Q5VUE5 145 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 SPRR3Q9UBC9 169 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 TRBV10-3A0A0K0K1G6 114 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 IGLV2-23P01705 113 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 SAA4P35542 130 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 LRCOL1A6NCL2 159 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 IGLV4-3A0A075B6K6 122 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 LYNX1G3V0Z9 82 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 IGLV3-19P01714 112 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 LYNX1P0DP58 116 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 DEFB131AP59861 70 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 FAM19A4Q96LR4 140 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 TRBV10-1A0A0K0K1A3 114 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 BCE1O60756 84 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 CTSGP08311 255 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 CFHR3Q02985 330 aa3.35□□□□□ -1.87
CDH8-205ENST00000577730 CRIP1P50238 77 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 VWCEQ96DN2 955 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 HTN3P15516 51 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 LINC00336Q6ZUF6 198 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 NRACQ8N912 160 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 DEFB105AQ8NG35 78 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 UBE2E2Q96LR5 201 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 CXCL6P80162 114 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 ATP1A1-AS1Q5TC04 95 aa3.34□□□□□ -1.87
CDH8-205ENST00000577730 C17orf82Q86X59 251 aaPredicted RBP3.34□□□□□ -1.87
CDH8-205ENST00000577730 IGLV11-55A0A075B6I3 123 aa3.34□□□□□ -1.88
CDH8-205ENST00000577730 COX7BP24311 80 aa3.34□□□□□ -1.88
CDH8-205ENST00000577730 CDKN2A-AS1Q9UH64 79 aa3.34□□□□□ -1.88
CDH8-205ENST00000577730 Q8N6K4 173 aa3.34□□□□□ -1.88
CDH8-205ENST00000577730 DOCK4Q8N1I0 1966 aa3.34□□□□□ -1.88
CDH8-205ENST00000577730 TNRC6AQ8NDV7 1962 aaKnown RBP3.33□□□□□ -1.88
CDH8-205ENST00000577730 ANKRD36A6QL64 1941 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms