RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 MYLKQ15746 1914 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 RNF17Q9BXT8 1623 aaKnown RBP2.62□□□□□ -1.99
C11orf54-213ENST00000533585 IGKV2-28A0A075B6P5 120 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 H3BQF6 201 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 IGKV2D-28P01615 120 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 IGKV3-11P04433 115 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 POLR2JP52435 117 aaKnown RBP2.62□□□□□ -1.99
C11orf54-213ENST00000533585 KRTAP10-11P60412 298 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 RBM3P98179 157 aaKnown RBP2.62□□□□□ -1.99
C11orf54-213ENST00000533585 IQCJQ1A5X6 159 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 KRTAP11-1Q8IUC1 163 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 SLIT2O94813 1529 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 LMTK2Q8IWU2 1503 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 MYO5CQ9NQX4 1742 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 AKAP11Q9UKA4 1901 aa2.62□□□□□ -1.99
C11orf54-213ENST00000533585 CFAP74Q9C0B2 1584 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 RBBP6Q7Z6E9 1792 aaKnown RBP2.61□□□□□ -1.99
C11orf54-213ENST00000533585 SCN3AQ9NY46 2000 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 SHROOM2Q13796 1616 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 USP32Q8NFA0 1604 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 RTL8CO15255 209 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 GAS8-AS1O95177 125 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 PRB4P10163 310 aaPredicted RBP2.61□□□□□ -1.99
C11orf54-213ENST00000533585 ELOBQ15370 118 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 ZNF833PQ6ZTB9 187 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 KIDINS220Q9ULH0 1771 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 CROCCQ5TZA2 2017 aa2.61□□□□□ -1.99
C11orf54-213ENST00000533585 DEPDC5O75140 1603 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 C10orf71Q711Q0 1435 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 TET3O43151 1660 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 KDM5AP29375 1690 aaKnown RBP2.6□□□□□ -1.99
C11orf54-213ENST00000533585 NRXN1Q9ULB1 1477 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.6□□□□□ -1.99
C11orf54-213ENST00000533585 GNGT2O14610 69 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 P0C880 135 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 IL7P13232 177 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 CBLN1P23435 193 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 UBE2G1P62253 170 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 MOBPQ13875 183 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 SLC48A1Q6P1K1 146 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 UNQ5815/PRO19632Q6UWF5 114 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 LYPD1Q8N2G4 141 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 PPDPFLQ8WWR9 84 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 TIMM21Q9BVV7 248 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 BET1LQ9NYM9 111 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 VWDEQ8N2E2 1590 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 MYO16Q9Y6X6 1858 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 KDM6BO15054 1643 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 MYO3AQ8NEV4 1616 aa2.6□□□□□ -1.99
C11orf54-213ENST00000533585 CPSF1Q10570 1443 aaKnown RBP2.59□□□□□ -1.99
C11orf54-213ENST00000533585 COL24A1Q17RW2 1714 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 ARHGAP32A7KAX9 2087 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 SAMD9LQ8IVG5 1584 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 Q0VG73 95 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 PDE6HQ13956 83 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 COMMD6Q7Z4G1 85 aa2.59□□□□□ -1.99
C11orf54-213ENST00000533585 IQGAP1P46940 1657 aa2.59□□□□□ -2
C11orf54-213ENST00000533585 ANKRD36BQ8N2N9 1353 aa2.59□□□□□ -2
C11orf54-213ENST00000533585 CUL9Q8IWT3 2517 aa2.59□□□□□ -2
C11orf54-213ENST00000533585 MYO9BQ13459 2157 aa2.59□□□□□ -2
C11orf54-213ENST00000533585 MLH3Q9UHC1 1453 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 ABCC1P33527 1531 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.58□□□□□ -2
C11orf54-213ENST00000533585 MCM3APO60318 1980 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 MAP3K4Q9Y6R4 1608 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 SLC25A6P12236 298 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 RHOHQ15669 191 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 SPRNQ5BIV9 151 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 C9orf116Q5BN46 136 aaPredicted RBP2.58□□□□□ -2
C11orf54-213ENST00000533585 C1orf137Q5JT78 98 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 OR10AG1Q8NH19 301 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 C4orf3Q8WVX3 66 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 STRCQ7RTU9 1775 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 ADGRB3O60242 1522 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 SYCP2Q9BX26 1530 aa2.58□□□□□ -2
C11orf54-213ENST00000533585 UGGT1Q9NYU2 1555 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 MADDQ8WXG6 1647 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 DIDO1Q9BTC0 2240 aaKnown RBP2.57□□□□□ -2
C11orf54-213ENST00000533585 ZC3H13Q5T200 1668 aaKnown RBP2.57□□□□□ -2
C11orf54-213ENST00000533585 ROBO1Q9Y6N7 1651 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 IGLV6-57P01721 117 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 KRTAP26-1Q6PEX3 210 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.57□□□□□ -2
C11orf54-213ENST00000533585 PMCHL2Q9BQD1 86 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 NPVFQ9HCQ7 196 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 SMAD5-AS1Q9Y6J3 95 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 KIAA2026Q5HYC2 2103 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 CACNA1DQ01668 2161 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 ATP7AQ04656 1500 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 EFCAB6Q5THR3 1501 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 ABCA9Q8IUA7 1624 aa2.57□□□□□ -2
C11orf54-213ENST00000533585 KIAA1549Q9HCM3 1950 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 MUC4Q99102 2169 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 IGKV1D-17A0A075B6S4 117 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 A0A0G2JQZ4 141 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 LRCOL1A6NCL2 159 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 F8W1H4 67 aa2.56□□□□□ -2
C11orf54-213ENST00000533585 IGFBP7Q16270 282 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms