RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZNF702PQ9H963 129 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 USP24Q9UPU5 2620 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 FAM208BQ5VWN6 2430 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 ZNF462Q96JM2 2506 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 DPM2O94777 84 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 RASL10AQ92737 203 aa8.3□□□□□ -1.08
CMSS1-208ENST00000496116 UTP20O75691 2785 aaKnown RBP8.3□□□□□ -1.08
CMSS1-208ENST00000496116 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 CR1P17927 2039 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 A0A087WW49 117 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 C7orf71A4D174 169 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-208ENST00000496116 K7EQG2 157 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 NXPH4O95158 308 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 SEC11AP67812 179 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 TRAV12-3A0A0B4J271 114 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 A0A0J9YX75 114 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 SPRY2O43597 315 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 CD7P09564 240 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 HOXD3P31249 432 aaPredicted RBP8.29□□□□□ -1.08
CMSS1-208ENST00000496116 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 Q6ZVH6 145 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
CMSS1-208ENST00000496116 TCTAP57738 103 aa8.28□□□□□ -1.08
CMSS1-208ENST00000496116 POM121L12Q8N7R1 296 aa8.28□□□□□ -1.08
CMSS1-208ENST00000496116 USP9YO00507 2555 aaPredicted RBP8.28□□□□□ -1.08
CMSS1-208ENST00000496116 TAX1BP3O14907 124 aa8.27□□□□□ -1.08
CMSS1-208ENST00000496116 DUSP14O95147 198 aaKnown RBP8.27□□□□□ -1.08
CMSS1-208ENST00000496116 CDKN1BP46527 198 aa8.27□□□□□ -1.08
CMSS1-208ENST00000496116 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.08
CMSS1-208ENST00000496116 RPL39LQ96EH5 51 aaKnown RBP8.27□□□□□ -1.08
CMSS1-208ENST00000496116 Q96MF0 132 aa8.27□□□□□ -1.08
CMSS1-208ENST00000496116 PRRC2AP48634 2157 aaKnown RBP8.27□□□□□ -1.09
CMSS1-208ENST00000496116 A0A087WX48 190 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 HSD52Q0P140 79 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 TOMM6Q96B49 74 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 TMEM160Q9NX00 188 aa8.27□□□□□ -1.09
CMSS1-208ENST00000496116 TRAV12-1A0A0B4J245 112 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 A6NDN8 102 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 CCL25O15444 150 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 UBR5O95071 2799 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-208ENST00000496116 FOSL1P15407 271 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 PLNP26678 52 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 VAMP3Q15836 100 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
CMSS1-208ENST00000496116 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 Q8N2B8 174 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 KIF25-AS1Q9Y6Z4 181 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 LRRK2Q5S007 2527 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 ZFYVE26Q68DK2 2539 aa8.26□□□□□ -1.09
CMSS1-208ENST00000496116 MUC4Q99102 2169 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 FBN2P35556 2912 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 H7C1H1 209 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 HLA-DRB4P13762 266 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 RPL32P62910 135 aaKnown RBP8.25□□□□□ -1.09
CMSS1-208ENST00000496116 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 TCTEX1D4Q5JR98 221 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 GTSCR1Q86UQ5 136 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 HLA-DRB4X5D2U9 266 aa8.25□□□□□ -1.09
CMSS1-208ENST00000496116 POLQO75417 2590 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 IGHV1OR15-1A0A075B7D0 117 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 F8VRH5 84 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 ADAMTSL5Q6ZMM2 481 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 TEX29Q8N6K0 151 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 C9orf85Q96MD7 179 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 CSTL1Q9H114 145 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 DOPEY2Q9Y3R5 2298 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 IGHV3-16A0A0C4DH30 117 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 CBY3A6NI87 242 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 F5H697 171 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 LINC00315P59091 139 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 SPINK13Q1W4C9 94 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 PEMTQ9UBM1 199 aa8.24□□□□□ -1.09
CMSS1-208ENST00000496116 IGKV2D-26A0A0A0MRZ7 120 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 LINC01619G3V211 115 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 CHTOPQ9Y3Y2 248 aaKnown RBP8.23□□□□□ -1.09
CMSS1-208ENST00000496116 A0A087WWL8 130 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 SLURP1P55000 103 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 SUMO4Q6EEV6 95 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 ERASQ7Z444 233 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 Q8N1Y9 231 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 OR4C5Q8NGB2 326 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 KIR2DL4Q99706 377 aa8.23□□□□□ -1.09
CMSS1-208ENST00000496116 PTPN13Q12923 2485 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms