RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 IGKV3D-20A0A0C4DH25 116 aa14.86□□□□□ -0.03
LIME1-203ENST00000465591 GATA1P15976 413 aaPredicted RBP14.86□□□□□ -0.03
LIME1-203ENST00000465591 SRIP30626 198 aa14.86□□□□□ -0.03
LIME1-203ENST00000465591 PPT1P50897 306 aa14.86□□□□□ -0.03
LIME1-203ENST00000465591 LINC00315P59091 139 aa14.86□□□□□ -0.03
LIME1-203ENST00000465591 ZNF876PQ49A33 203 aa14.86□□□□□ -0.03
LIME1-203ENST00000465591 PGPEP1LA6NFU8 196 aa14.85□□□□□ -0.03
LIME1-203ENST00000465591 TRAV1-1A0A0B4J248 108 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 A0A1B0GV50 99 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 RS1O15537 224 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 ORM1P02763 201 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 CRIP1P50238 77 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 ZNF506Q5JVG8 444 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 CFAP126Q5VTH2 177 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 ALKAL2Q6UX46 152 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 Q6ZRN7 208 aaPredicted RBP14.84□□□□□ -0.03
LIME1-203ENST00000465591 PCNPQ8WW12 178 aaKnown RBP14.84□□□□□ -0.03
LIME1-203ENST00000465591 HIST1H2BAQ96A08 127 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 TNFRSF18Q9Y5U5 241 aa14.84□□□□□ -0.03
LIME1-203ENST00000465591 WFDC10BQ8IUB3 73 aa14.83□□□□□ -0.04
LIME1-203ENST00000465591 ZC2HC1AQ96GY0 325 aa14.83□□□□□ -0.04
LIME1-203ENST00000465591 DNAH5Q8TE73 4624 aa14.83□□□□□ -0.04
LIME1-203ENST00000465591 IGHV3-73A0A0B4J1V6 119 aa14.82□□□□□ -0.04
LIME1-203ENST00000465591 CST9LP1Q5W188 147 aa14.82□□□□□ -0.04
LIME1-203ENST00000465591 HSPG2P98160 4391 aa14.82□□□□□ -0.04
LIME1-203ENST00000465591 FABP5P3A8MUU1 101 aa14.81□□□□□ -0.04
LIME1-203ENST00000465591 C16orf90A8MZG2 172 aa14.81□□□□□ -0.04
LIME1-203ENST00000465591 BTF3P20290 206 aaKnown RBP14.81□□□□□ -0.04
LIME1-203ENST00000465591 BLOC1S1P78537 153 aa14.81□□□□□ -0.04
LIME1-203ENST00000465591 SLC25A29Q8N8R3 303 aa14.81□□□□□ -0.04
LIME1-203ENST00000465591 PTH2Q96A98 100 aa14.81□□□□□ -0.04
LIME1-203ENST00000465591 PAGE4O60829 102 aa14.8□□□□□ -0.04
LIME1-203ENST00000465591 SPATA12Q7Z6I5 190 aa14.8□□□□□ -0.04
LIME1-203ENST00000465591 TXNDC17Q9BRA2 123 aa14.8□□□□□ -0.04
LIME1-203ENST00000465591 TCEAL7Q9BRU2 100 aa14.8□□□□□ -0.04
LIME1-203ENST00000465591 PCLOQ9Y6V0 5065 aa14.8□□□□□ -0.04
LIME1-203ENST00000465591 KRTAP10-2P60368 255 aa14.79□□□□□ -0.04
LIME1-203ENST00000465591 COX8CQ7Z4L0 72 aa14.79□□□□□ -0.04
LIME1-203ENST00000465591 MANBALQ9NQG1 85 aa14.79□□□□□ -0.04
LIME1-203ENST00000465591 SH2D1AO60880 128 aa14.78□□□□□ -0.04
LIME1-203ENST00000465591 Q6ZSN1 163 aa14.78□□□□□ -0.04
LIME1-203ENST00000465591 NHLRC2Q8NBF2 726 aa14.78□□□□□ -0.04
LIME1-203ENST00000465591 FMC1Q96HJ9 113 aa14.78□□□□□ -0.04
LIME1-203ENST00000465591 B4DEV8 164 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 M0R036 132 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 IFNA1P01562 189 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 ASIPP42127 132 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 CCL20P78556 96 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 JPT2Q9H910 190 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 GNG13Q9P2W3 67 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 ZFP30Q9Y2G7 519 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 LY96Q9Y6Y9 160 aa14.77□□□□□ -0.05
LIME1-203ENST00000465591 APOBP04114 4563 aaKnown RBP14.77□□□□□ -0.05
LIME1-203ENST00000465591 TRBV6-1A0A0K0K1D8 114 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 TRBV6-4A0A1B0GX49 114 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 KRBOX1C9JBD0 128 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 H3BVH4 76 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 LTAP01374 205 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 DNAH10OSP0CZ25 163 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 S100A4P26447 101 aaKnown RBP14.76□□□□□ -0.05
LIME1-203ENST00000465591 UBE2G1P62253 170 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 PARLQ9H300 379 aa14.76□□□□□ -0.05
LIME1-203ENST00000465591 GRIFINA4D1Z8 144 aa14.75□□□□□ -0.05
LIME1-203ENST00000465591 CIDEAO60543 219 aa14.75□□□□□ -0.05
LIME1-203ENST00000465591 AKR1C3P42330 323 aa14.75□□□□□ -0.05
LIME1-203ENST00000465591 RHOHQ15669 191 aa14.75□□□□□ -0.05
LIME1-203ENST00000465591 IL36BQ9NZH7 164 aa14.75□□□□□ -0.05
LIME1-203ENST00000465591 TAGLN2P37802 199 aaKnown RBP14.74□□□□□ -0.05
LIME1-203ENST00000465591 TIRAPP58753 221 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 ZNF674Q2M3X9 581 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 DNLZQ5SXM8 178 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 FAM162BQ5T6X4 162 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 DMRTA1Q5VZB9 504 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 TEX261Q6UWH6 196 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 SH2D6Q7Z4S9 175 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 PRADC1Q9BSG0 188 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 SAMD10Q9BYL1 202 aa14.74□□□□□ -0.05
LIME1-203ENST00000465591 SCO2A0A1W2PP80 73 aa14.73□□□□□ -0.05
LIME1-203ENST00000465591 ARMS2P0C7Q2 107 aa14.73□□□□□ -0.05
LIME1-203ENST00000465591 UFSP1Q6NVU6 142 aa14.73□□□□□ -0.05
LIME1-203ENST00000465591 Q9UF83 564 aa14.73□□□□□ -0.05
LIME1-203ENST00000465591 TMSB15BA0A087X1C1 80 aa14.72□□□□□ -0.05
LIME1-203ENST00000465591 MGST1P10620 155 aaKnown RBP14.72□□□□□ -0.05
LIME1-203ENST00000465591 PIK3CD-AS1Q5SR53 167 aa14.72□□□□□ -0.05
LIME1-203ENST00000465591 A8MWV9 139 aa14.71□□□□□ -0.05
LIME1-203ENST00000465591 EVI2AP22794 236 aa14.71□□□□□ -0.05
LIME1-203ENST00000465591 FUSP35637 526 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIME1-203ENST00000465591 LINC01559Q495D7 138 aa14.71□□□□□ -0.05
LIME1-203ENST00000465591 TRAV9-2A0A087WT02 112 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 S100A9P06702 114 aaKnown RBP14.7□□□□□ -0.06
LIME1-203ENST00000465591 ZFP2Q6ZN57 461 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 KRTAP4-5Q9BYR2 181 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 SCRT2Q9NQ03 307 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 MSRB1Q9NZV6 116 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 VAX2Q9UIW0 290 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 ABCA13Q86UQ4 5058 aa14.7□□□□□ -0.06
LIME1-203ENST00000465591 CRYGDP07320 174 aa14.69□□□□□ -0.06
LIME1-203ENST00000465591 LINC00694P0DN24 101 aa14.69□□□□□ -0.06
LIME1-203ENST00000465591 BCL2P10415 239 aa14.69□□□□□ -0.06
LIME1-203ENST00000465591 MEF2BQ02080 365 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms