RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 TRAV26-1A0A087WT03 109 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 A0A1B0GV50 99 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 FBLL1A6NHQ2 334 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 K7EQM0 130 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 PAGE4O60829 102 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 IFNA7P01567 189 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 BTF3P20290 206 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 EIF5AP63241 154 aaKnown RBP5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 SMUG1Q53HV7 270 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 FAM159AQ6UWV7 190 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 Q6ZRN7 208 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 HIST1H2BAQ96A08 127 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 VSIG2Q96IQ7 327 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 NDFIP1Q9BT67 221 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 NKX6-2Q9C056 277 aaPredicted RBP5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 Q9H8V8 135 aa5.45□□□□□ -1.54
CDC42BPA-210ENST00000462553 TRGV2A0A075B6R0 118 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 IGKV3D-20A0A0C4DH25 116 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 A0A0J9YY99 117 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 TRBV6-1A0A0K0K1D8 114 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 IGHV3-53P01767 116 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 PFN1P07737 140 aaKnown RBP5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 SULT1A2P50226 295 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 CRIP1P50238 77 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 CCL20P78556 96 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 OR5I1Q13606 314 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 ESRGQ1W209 222 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 COX8CQ7Z4L0 72 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 SLC51BQ86UW2 128 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 SFT2D1Q8WV19 159 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 RASL10AQ92737 203 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZC2HC1AQ96GY0 325 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 TCEAL7Q9BRU2 100 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 SPXQ9BT56 116 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 SDF2L1Q9HCN8 221 aa5.44□□□□□ -1.54
CDC42BPA-210ENST00000462553 TRAV1-1A0A0B4J248 108 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 A0A1W2PPQ1 181 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 H3BNG1 76 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 M0R2P5 195 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 SFTA3P0C7M3 94 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 PPT1P50897 306 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 FHL2Q14192 279 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 CST9LP1Q5W188 147 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 FMC1Q96HJ9 113 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZNF479Q96JC4 524 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 KCNS1Q96KK3 526 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 C9orf85Q96MD7 179 aa5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 MRPS16Q9Y3D3 137 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-210ENST00000462553 A0A096LPF7 62 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 TRAV4A0A0B4J268 109 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 SH2D1AO60880 128 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 LTAP01374 205 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 AKR1C3P42330 323 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 RAB5CP51148 216 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 NKX2-5P52952 324 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 CRYBA4P53673 196 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 LINC00315P59091 139 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZFP69Q49AA0 526 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 SAPCD1Q5SSQ6 148 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 C11orf52Q96A22 123 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZFP30Q9Y2G7 519 aa5.42□□□□□ -1.54
CDC42BPA-210ENST00000462553 PGPEP1LA6NFU8 196 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZNF674Q2M3X9 581 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 MLST8Q9BVC4 326 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 MANBALQ9NQG1 85 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 GNG13Q9P2W3 67 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
CDC42BPA-210ENST00000462553 FABP5P3A8MUU1 101 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 B4DEV8 164 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 KRBOX1C9JBD0 128 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 RS1O15537 224 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 GATA1P15976 413 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 XGP55808 180 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 UBE2G1P62253 170 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 ZNF506Q5JVG8 444 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 DNLZQ5SXM8 178 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 FAM162BQ5T6X4 162 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 EIF5AL1Q6IS14 154 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 NHLRC2Q8NBF2 726 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 PTH2Q96A98 100 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 DERL1Q9BUN8 251 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 PRO0255Q9UI72 69 aa5.4□□□□□ -1.54
CDC42BPA-210ENST00000462553 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-210ENST00000462553 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.55
CDC42BPA-210ENST00000462553 HMCN2Q8NDA2 5059 aa5.4□□□□□ -1.55
CDC42BPA-210ENST00000462553 TRGV4A0A0C4DH28 118 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 LOC100131303A0A0U1RQF7 123 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 H3BVH4 76 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 M0R036 132 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 IGLV2-8P01709 118 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 BCL2P10415 239 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 RPL35P42766 123 aaKnown RBP5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 SLAQ13239 276 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 ZNF876PQ49A33 203 aa5.39□□□□□ -1.55
CDC42BPA-210ENST00000462553 CFAP126Q5VTH2 177 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms