RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 P01737 135 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 PRM2P04554 102 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 CACNG7P62955 275 aa7.54□□□□□ -1.2
UBR4-208ENST00000459947 A0A1W2PPQ1 181 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 CCL18P55774 89 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 ZNF876PQ49A33 203 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
UBR4-208ENST00000459947 PRADC1Q9BSG0 188 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 PAX4O43316 350 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 OR5AL1P0C617 328 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 WDR73Q6P4I2 378 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 POM121L12Q8N7R1 296 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 PARLQ9H300 379 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 TGP01266 2768 aa7.53□□□□□ -1.2
UBR4-208ENST00000459947 F2Z2F3 143 aa7.52□□□□□ -1.2
UBR4-208ENST00000459947 TENM3Q9P273 2699 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 RNASE3P12724 160 aaKnown RBP7.52□□□□□ -1.21
UBR4-208ENST00000459947 CRIP1P50238 77 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 PRR27Q6MZM9 219 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 SMIM7Q9BQ49 75 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 SNAI2O43623 268 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 LY6G6CO95867 125 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 RAB19A4D1S5 217 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 H3BVH4 76 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 ARMS2P0C7Q2 107 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 RHOHQ15669 191 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 CT83Q5H943 113 aa7.52□□□□□ -1.21
UBR4-208ENST00000459947 C19orf71A6NCJ1 209 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 M0R036 132 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 SRP19P09132 144 aaKnown RBP7.51□□□□□ -1.21
UBR4-208ENST00000459947 OR2D3Q8NGH3 330 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 HHLA3Q9XRX5 114 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 TRBV6-4A0A1B0GX49 114 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 NXPH4O95158 308 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 TIRAPP58753 221 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 Q6ZQT7 251 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 NUDT3O95989 172 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 IGLV2-8P01709 118 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 CRYBA4P53673 196 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 FHL2Q14192 279 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 NHLRC2Q8NBF2 726 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
UBR4-208ENST00000459947 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
UBR4-208ENST00000459947 BTF3P20290 206 aaKnown RBP7.5□□□□□ -1.21
UBR4-208ENST00000459947 CLLU1Q5K131 121 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 C15orf54Q8N8G6 183 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 SSBP4Q9BWG4 385 aaPredicted RBP7.5□□□□□ -1.21
UBR4-208ENST00000459947 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
UBR4-208ENST00000459947 SFRP2Q96HF1 295 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
UBR4-208ENST00000459947 TRGC1P0CF51 173 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 FER1L6-AS1Q8NA97 138 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 BORCS7Q96B45 105 aa7.5□□□□□ -1.21
UBR4-208ENST00000459947 A8MWL6 223 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 HOXA5P20719 270 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 SRIP30626 198 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 CFAP126Q5VTH2 177 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 NAT8Q9UHE5 227 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 PGPEP1LA6NFU8 196 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 S100A6P06703 90 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 SMIM17P0DL12 118 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 SPANXN1Q5VSR9 72 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 OSTCQ9NRP0 149 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 GRIFINA4D1Z8 144 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 TMEM241Q24JQ0 296 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 TTC32Q5I0X7 151 aa7.49□□□□□ -1.21
UBR4-208ENST00000459947 MRPS16Q9Y3D3 137 aaKnown RBP7.49□□□□□ -1.21
UBR4-208ENST00000459947 TMSB15BA0A087X1C1 80 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 NEGR1Q7Z3B1 354 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 TRBV10-1A0A0K0K1A3 114 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 K7EP13 123 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 IGHV3-53P01767 116 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 SMIM15Q7Z3B0 74 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 CEBPGP53567 150 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 SOHLH1Q5JUK2 328 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 OCC1Q8TAD7 63 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 ZNF479Q96JC4 524 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 GFRA4Q9GZZ7 299 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
UBR4-208ENST00000459947 H7C1H1 209 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 IGLC6P0CF74 106 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 COTL1Q14019 142 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 UQCC3Q6UW78 93 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 MAJINQ3KP22 176 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 NUDT10Q8NFP7 164 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 NUDT11Q96G61 164 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 CBY1Q9Y3M2 126 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 TRBV20OR9-2A0A075B6H5 130 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 A0A0J9YY99 117 aa7.47□□□□□ -1.21
UBR4-208ENST00000459947 CTRLP40313 264 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms