RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TRAV9-2A0A087WT02 112 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 TRAV8-1A0A0A6YYK1 113 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 IGHV3-16A0A0C4DH30 117 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 F6UZH7 168 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 M0R2P5 195 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 GYPEP15421 78 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 SRIP30626 198 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 GNG5P63218 68 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 EIF5AP63241 154 aaKnown RBP6.43□□□□□ -1.38
NUP50-205ENST00000419387 DPPA3Q6W0C5 159 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 MAPKAPK5-AS1Q8N8E1 139 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 OR4C5Q8NGB2 326 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 PCNPQ8WW12 178 aaKnown RBP6.43□□□□□ -1.38
NUP50-205ENST00000419387 KCNS1Q96KK3 526 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 SDF2L1Q9HCN8 221 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 TMEM167BQ9NRX6 74 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 EPDR1Q9UM22 224 aa6.43□□□□□ -1.38
NUP50-205ENST00000419387 SERTM2A0A1B0GWG4 89 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 C9JCJ5 164 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 TCRAP04437 139 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 TYMSP04818 313 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 NFE4Q86UQ8 179 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 LYPD6BQ8NI32 183 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 SGK494Q96LW2 274 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 LINC00479Q96M42 142 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
NUP50-205ENST00000419387 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 LY96Q9Y6Y9 160 aa6.42□□□□□ -1.38
NUP50-205ENST00000419387 K7EP13 123 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 K7EQM0 130 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 EREGO14944 169 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 PAGE4O60829 102 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 EVI2AP22794 236 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 RAB5CP51148 216 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 UBE2G2P60604 165 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 ALKAL2Q6UX46 152 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 C5orf17Q8NAS9 161 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 NDFIP1Q9BT67 221 aa6.41□□□□□ -1.38
NUP50-205ENST00000419387 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.38
NUP50-205ENST00000419387 LOC100131303A0A0U1RQF7 123 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 A0A1B0GV50 99 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 CIDEAO60543 219 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 GATA1P15976 413 aaPredicted RBP6.4□□□□□ -1.38
NUP50-205ENST00000419387 ZNF80P51504 273 aaPredicted RBP6.4□□□□□ -1.38
NUP50-205ENST00000419387 ERVFC1-1P60608 527 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 EIF5AL1Q6IS14 154 aaKnown RBP6.4□□□□□ -1.38
NUP50-205ENST00000419387 SH2D6Q7Z4S9 175 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 WFDC10BQ8IUB3 73 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 Q8N1X5 172 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 MSRB1Q9NZV6 116 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 C11orf21Q9P2W6 132 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 PSG8Q9UQ74 426 aa6.4□□□□□ -1.38
NUP50-205ENST00000419387 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
NUP50-205ENST00000419387 GCGP01275 180 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
NUP50-205ENST00000419387 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 TIRAPP58753 221 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 FLI1Q01543 452 aaPredicted RBP6.39□□□□□ -1.39
NUP50-205ENST00000419387 ZNF876PQ49A33 203 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 SCRT2Q9NQ03 307 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 ARL2-SNX15V9GYD0 113 aa6.39□□□□□ -1.39
NUP50-205ENST00000419387 A0A087WTM6 91 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 RS1O15537 224 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 CRYGDP07320 174 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 CRIP1P50238 77 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 SAPCD1Q5SSQ6 148 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 CFAP126Q5VTH2 177 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 CDPF1Q6NVV7 123 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 TEX261Q6UWH6 196 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 PRNTQ86SH4 94 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 C10orf126Q8N4M7 172 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 SLC25A29Q8N8R3 303 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 TMEM75Q8N9X5 138 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 NHLRC2Q8NBF2 726 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 PTH2Q96A98 100 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
NUP50-205ENST00000419387 NKX6-2Q9C056 277 aaPredicted RBP6.38□□□□□ -1.39
NUP50-205ENST00000419387 IGHV3-73A0A0B4J1V6 119 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 TRBV6-4A0A1B0GX49 114 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 PGPEP1LA6NFU8 196 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 PEX7O00628 323 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 RNASE3P12724 160 aaKnown RBP6.37□□□□□ -1.39
NUP50-205ENST00000419387 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
NUP50-205ENST00000419387 PPT1P50897 306 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 CST9LP1Q5W188 147 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 HIST1H2BAQ96A08 127 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 PRADC1Q9BSG0 188 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
NUP50-205ENST00000419387 TRAV8-6A0A0B4J262 113 aa6.36□□□□□ -1.39
NUP50-205ENST00000419387 IGHV3-38A0A0C4DH36 116 aa6.36□□□□□ -1.39
NUP50-205ENST00000419387 TRBV6-1A0A0K0K1D8 114 aa6.36□□□□□ -1.39
NUP50-205ENST00000419387 IFITM2Q01629 132 aa6.36□□□□□ -1.39
NUP50-205ENST00000419387 RHOHQ15669 191 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms