RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 IGKV1OR2-108A0A075B7D4 117 aa9.22□□□□□ -0.93
PTPRF-205ENST00000414879 DAZ2Q13117 558 aaKnown RBP9.22□□□□□ -0.93
PTPRF-205ENST00000414879 DAZ4Q86SG3 579 aaKnown RBP9.22□□□□□ -0.93
PTPRF-205ENST00000414879 DAZ3Q9NR90 486 aaKnown RBP9.22□□□□□ -0.93
PTPRF-205ENST00000414879 PRB4P10163 310 aaPredicted RBP9.22□□□□□ -0.93
PTPRF-205ENST00000414879 ABCA1O95477 2261 aa9.22□□□□□ -0.93
PTPRF-205ENST00000414879 HLA-DMBP28068 263 aa9.22□□□□□ -0.93
PTPRF-205ENST00000414879 A0A1B0GV90 55 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 SIVA1O15304 175 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 ATP5G1P05496 136 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.93
PTPRF-205ENST00000414879 DEFB136Q30KP8 78 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 CST9LQ9H4G1 147 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 BPTFQ12830 3046 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 hDV102S1A0JD36 115 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 RIPPLY3P57055 190 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 DOPEY2Q9Y3R5 2298 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 ADAMTS20P59510 1910 aa9.21□□□□□ -0.93
PTPRF-205ENST00000414879 CTRLP40313 264 aa9.21□□□□□ -0.94
PTPRF-205ENST00000414879 BRWD1-AS2P59051 145 aa9.21□□□□□ -0.94
PTPRF-205ENST00000414879 MBD6Q96DN6 1003 aa9.21□□□□□ -0.94
PTPRF-205ENST00000414879 TTC32Q5I0X7 151 aa9.21□□□□□ -0.94
PTPRF-205ENST00000414879 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
PTPRF-205ENST00000414879 IGKV1D-37A0A075B6S9 117 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 F6UB75 175 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 EREGO14944 169 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 Q6ZPA2 131 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 IGHV3-64A0A075B6Q5 118 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 E7EUB6 86 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 HIVEP2P31629 2446 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 A0A0J9YX75 114 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 GNRH2O43555 120 aa9.2□□□□□ -0.94
PTPRF-205ENST00000414879 NOP10Q9NPE3 64 aaKnown RBP9.2□□□□□ -0.94
PTPRF-205ENST00000414879 PCNX3Q9H6A9 2034 aa9.19□□□□□ -0.94
PTPRF-205ENST00000414879 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
PTPRF-205ENST00000414879 DLX4Q92988 240 aaPredicted RBP9.19□□□□□ -0.94
PTPRF-205ENST00000414879 CENPFP49454 3210 aa9.19□□□□□ -0.94
PTPRF-205ENST00000414879 Q8N6K4 173 aa9.19□□□□□ -0.94
PTPRF-205ENST00000414879 MORN5Q5VZ52 161 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 PIFOQ8TCI5 191 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 ICOSQ9Y6W8 199 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 ARHGAP21Q5T5U3 1957 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 K7EQD1 137 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 COX8AP10176 69 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 CFHR3Q02985 330 aa9.18□□□□□ -0.94
PTPRF-205ENST00000414879 HERV-K104P63124 156 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 PSMG3-AS1Q96PY0 264 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 MRPL36Q9P0J6 103 aaKnown RBP9.17□□□□□ -0.94
PTPRF-205ENST00000414879 DSCAMO60469 2012 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 IL17DQ8TAD2 202 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 CITED2Q99967 270 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-205ENST00000414879 PLA2G2EQ9NZK7 142 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 GAGE6Q13070 117 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 ZNF747Q9BV97 191 aa9.17□□□□□ -0.94
PTPRF-205ENST00000414879 TRAV26-2A0A0B4J265 109 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 SPG11Q96JI7 2443 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 NDUFA12Q9UI09 145 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
PTPRF-205ENST00000414879 C19orf71A6NCJ1 209 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 ZNF503Q96F45 646 aa9.16□□□□□ -0.94
PTPRF-205ENST00000414879 MPV17L2Q567V2 206 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 MRPL35Q9NZE8 188 aaKnown RBP9.15□□□□□ -0.94
PTPRF-205ENST00000414879 ARFGEF3Q5TH69 2177 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 A0A0U1RRA0 63 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 Q6ZWC4 215 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 TMEM61Q8N0U2 210 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 ATP6V0E2Q8NHE4 81 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 PRSS47A8MTI9 375 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 C10orf126Q8N4M7 172 aa9.15□□□□□ -0.94
PTPRF-205ENST00000414879 F8WEM9 126 aa9.15□□□□□ -0.95
PTPRF-205ENST00000414879 IGLC3P0DOY3 106 aa9.15□□□□□ -0.95
PTPRF-205ENST00000414879 SUMO4Q6EEV6 95 aa9.15□□□□□ -0.95
PTPRF-205ENST00000414879 TSPAN13O95857 204 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 WFDC11Q8NEX6 87 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 J3QQQ9 107 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 K7EQG2 157 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
PTPRF-205ENST00000414879 KIR3DS1Q14943 382 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 ZNF580Q9UK33 172 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 ADAMTSL5Q6ZMM2 481 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 STPG4Q8N801 248 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 Q6ZVH6 145 aa9.14□□□□□ -0.95
PTPRF-205ENST00000414879 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
PTPRF-205ENST00000414879 Q8N1Y9 231 aa9.13□□□□□ -0.95
PTPRF-205ENST00000414879 CCL18P55774 89 aa9.13□□□□□ -0.95
PTPRF-205ENST00000414879 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
PTPRF-205ENST00000414879 MAP6D1Q9H9H5 199 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms