RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 COL8A2P25067 703 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 QRFPP83859 136 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 FOXF1Q12946 379 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 DEFB109BQ30KR1 87 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 C2orf83Q53S99 150 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 GLIPR1L1Q6UWM5 242 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 C3orf56Q8N813 242 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 Q8NAQ8 132 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 OR5H6Q8NGV6 325 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 PRELID3AQ96N28 172 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 STAB1Q9NY15 2570 aa3.96□□□□□ -1.78
TRAV35-201ENST00000390462 MYO7BQ6PIF6 2116 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 COL6A5A8TX70 2615 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 FLNAP21333 2647 aaKnown RBP3.95□□□□□ -1.78
TRAV35-201ENST00000390462 MAP1AP78559 2803 aaPredicted RBP3.95□□□□□ -1.78
TRAV35-201ENST00000390462 IGHV3OR16-8A0A075B7F1 116 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 A0A1B0GU33 70 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 C7orf71A4D174 169 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF670-ZNF695F2Z2N8 137 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 CCL4P13236 92 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 C7orf65Q6ZTY9 151 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 C3orf62Q6ZUJ4 267 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 Q8NDZ9 215 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 TXNL4BQ9NX01 149 aaKnown RBP3.95□□□□□ -1.78
TRAV35-201ENST00000390462 JMJD1CQ15652 2540 aa3.95□□□□□ -1.78
TRAV35-201ENST00000390462 OR2T8A6NH00 312 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF727A8MUV8 499 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 MT-ND6P03923 174 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 TCRAP04437 139 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 S100A8P05109 93 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF22P17026 224 aaPredicted RBP3.94□□□□□ -1.78
TRAV35-201ENST00000390462 DIAPH2-AS1Q14236 149 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF880Q6PDB4 577 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 DPPA3Q6W0C5 159 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 MORN4Q8NDC4 146 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 PPP3R2Q96LZ3 170 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 FAM215AQ9Y5M1 114 aa3.94□□□□□ -1.78
TRAV35-201ENST00000390462 PRRC2AP48634 2157 aaKnown RBP3.94□□□□□ -1.78
TRAV35-201ENST00000390462 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 A0A0D9SG52 128 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 SPTY2D1-AS1A0A0U1RR47 76 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 C20orf202A1L168 122 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 A8MWV9 139 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 CORTO00230 105 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 RER1O15258 196 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 HOXB6P17509 224 aaKnown RBP3.93□□□□□ -1.78
TRAV35-201ENST00000390462 FOXA3P55318 350 aaPredicted RBP3.93□□□□□ -1.78
TRAV35-201ENST00000390462 KRTAP10-9P60411 292 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 DYNLT1P63172 113 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF181Q2M3W8 571 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 KPRPQ5T749 579 aaPredicted RBP3.93□□□□□ -1.78
TRAV35-201ENST00000390462 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 LYPD6Q86Y78 171 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 TCTEX1D1Q8N7M0 179 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 OR10AC1Q8NH08 325 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 ZNF407Q9C0G0 2248 aa3.93□□□□□ -1.78
TRAV35-201ENST00000390462 TRGV5A0A0B4J1U4 118 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 FAM236AA0A1B0GUQ0 79 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 FAM236BA0A1B0GV22 79 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 AKR1D1P51857 326 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 TMEM155Q4W5P6 130 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 SCIMPQ6UWF3 145 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 OR4B1Q8NGF8 309 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 MCEEQ96PE7 176 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 NAA38Q9BRA0 125 aaKnown RBP3.92□□□□□ -1.78
TRAV35-201ENST00000390462 TMEM191AQ9H0A3 160 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 SOX21Q9Y651 276 aaPredicted RBP3.92□□□□□ -1.78
TRAV35-201ENST00000390462 EML6Q6ZMW3 1958 aa3.92□□□□□ -1.78
TRAV35-201ENST00000390462 CUBNO60494 3623 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 NCOA6Q14686 2063 aaPredicted RBP3.91□□□□□ -1.78
TRAV35-201ENST00000390462 PLXNB1O43157 2135 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 ABCA4P78363 2273 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 IGLV3-12A0A075B6K2 115 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 IGLV3-9A0A075B6K5 115 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 TRAV27A0A087WT01 109 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 C11orf86A6NJI1 115 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 SDCBPO00560 298 aaPredicted RBP3.91□□□□□ -1.78
TRAV35-201ENST00000390462 UQCRQO14949 82 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 GNRH2O43555 120 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 SLC25A5P05141 298 aaKnown RBP3.91□□□□□ -1.78
TRAV35-201ENST00000390462 COX6A1P12074 109 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
TRAV35-201ENST00000390462 GUCA1AP43080 201 aaPredicted RBP3.91□□□□□ -1.78
TRAV35-201ENST00000390462 EBI3Q14213 229 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 AQP3Q92482 292 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 OR8B2Q96RD0 313 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 NIT2Q9NQR4 276 aa3.91□□□□□ -1.78
TRAV35-201ENST00000390462 H7C2G1 150 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 KLRD1Q13241 179 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 WFDC11Q8NEX6 87 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 DEDD2Q8WXF8 326 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 DIRC1Q969H9 104 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 PSMG3Q9BT73 122 aaPredicted RBP3.9□□□□□ -1.79
TRAV35-201ENST00000390462 AKAP6Q13023 2319 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 CCDC88CQ9P219 2028 aa3.9□□□□□ -1.79
TRAV35-201ENST00000390462 PCM1Q15154 2024 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 MXRA5Q9NR99 2828 aa3.89□□□□□ -1.79
TRAV35-201ENST00000390462 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms