RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 VPS13CQ709C8 3753 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 COX6B1P14854 86 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 RPL39LQ96EH5 51 aaKnown RBP8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 SIGMAR1Q99720 223 aa8.39□□□□□ -1.07
DNMT3A-203ENST00000380746 FAM231BA6NCW3 169 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 NPIPB6E9PJ23 425 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 Q8N6K4 173 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 AJUBAQ96IF1 538 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 JMJD8Q96S16 334 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 ASIPP42127 132 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 ZC2HC1BQ5TFG8 222 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 ST20Q9HBF5 79 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 SPINK13Q1W4C9 94 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 PRR9Q5T870 116 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 MRPL52Q86TS9 123 aaKnown RBP8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
DNMT3A-203ENST00000380746 IGHV3-64A0A075B6Q5 118 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 IGHG4P01861 327 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 ZNF56Q15929 161 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 C12orf54Q6X4T0 127 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 CLPSL1A2RUU4 121 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 M0QXV9 152 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 PRM2P04554 102 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 KNCNA6PVL3 124 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 MTURNQ8N3F0 131 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 SCGB3A1Q96QR1 104 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 CHD6Q8TD26 2715 aa8.37□□□□□ -1.07
DNMT3A-203ENST00000380746 ITPR3Q14573 2671 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 B4DSR2 109 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 C10orf105Q8TEF2 133 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 TRAV8-2A0A0B4J237 113 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 SCGB1D4Q6XE38 83 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 ZFHX3Q15911 3703 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 TMEM8BA6NDV4 472 aa8.36□□□□□ -1.07
DNMT3A-203ENST00000380746 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 TMEM97Q5BJF2 176 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 K7ERJ3 54 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 NHP2Q9NX24 153 aaKnown RBP8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 CD300EQ496F6 205 aaPredicted RBP8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 PRORYQ9H606 182 aa8.35□□□□□ -1.07
DNMT3A-203ENST00000380746 A0A0G2JLM5 398 aa8.34□□□□□ -1.07
DNMT3A-203ENST00000380746 EBI3Q14213 229 aa8.34□□□□□ -1.07
DNMT3A-203ENST00000380746 MRPS16Q9Y3D3 137 aaKnown RBP8.34□□□□□ -1.07
DNMT3A-203ENST00000380746 DAZ1Q9NQZ3 744 aaKnown RBP8.34□□□□□ -1.07
DNMT3A-203ENST00000380746 PEF1Q9UBV8 284 aaKnown RBP8.34□□□□□ -1.07
DNMT3A-203ENST00000380746 GATA3P23771 443 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 C9orf139Q6ZV77 190 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 TNFRSF18Q9Y5U5 241 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 HIST1H4GQ99525 98 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 H7C2G1 150 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 IGKCP01834 107 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 LAGE3Q14657 143 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 PIFOQ8TCI5 191 aa8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 NXT2Q9NPJ8 142 aaKnown RBP8.33□□□□□ -1.08
DNMT3A-203ENST00000380746 B5MCH6 92 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 HOXA3O43365 443 aaPredicted RBP8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 SRSF9Q13242 221 aaKnown RBP eCLIP8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 FAM110AQ9BQ89 295 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 SCRT2Q9NQ03 307 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 A0A096LNJ9 63 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 FAM223BA6NKX1 122 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 FAM223AQ8IWN6 122 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
DNMT3A-203ENST00000380746 IGKV2D-26A0A0A0MRZ7 120 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 COX8AP10176 69 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 G3V4G9 280 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 SNRPD3P62318 126 aaKnown RBP8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 C18orf65Q6ZTR6 163 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 DYNLRB2Q8TF09 96 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 DPM2O94777 84 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 SRSF1Q07955 248 aaKnown RBP eCLIP8.31□□□□□ -1.088e-8■■■■□ 19.5
DNMT3A-203ENST00000380746 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 MS4A6AQ9H2W1 248 aa8.31□□□□□ -1.08
DNMT3A-203ENST00000380746 IGHV7-4-1A0A0J9YVY3 117 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 A6NDN8 102 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 NDUFA4O00483 81 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 SLURP1P55000 103 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 MXRA5Q9NR99 2828 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 OVOL1O14753 267 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 DEFB131AP59861 70 aa8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 RPL32P62910 135 aaKnown RBP8.3□□□□□ -1.08
DNMT3A-203ENST00000380746 IGHV3-16A0A0C4DH30 117 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms