RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 E7EUB6 86 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 APRG1Q8IVJ8 170 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 RNF185Q96GF1 192 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 CCDC140Q96MF4 163 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 TMEM243Q9BU79 118 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 PCNX3Q9H6A9 2034 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3-11P01762 117 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 TIRAPP58753 221 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 LMO4P61968 165 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 MRPS36P82909 103 aaKnown RBP5.58□□□□□ -1.52
VTA1-202ENST00000367630 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 FAM222AQ5U5X8 452 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 RITA1Q96K30 269 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 CNTRLQ7Z7A1 2325 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 POM121L12Q8N7R1 296 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 PCSK5Q92824 1860 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 LINC00310P59036 64 aa5.58□□□□□ -1.52
VTA1-202ENST00000367630 DOCK7Q96N67 2140 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 C17orf77Q96MU5 243 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 GNLYP22749 145 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 KLLNB2CW77 178 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 CKS1BP61024 79 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 C20orf203Q8NBC4 194 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 TSSC4Q9Y5U2 329 aaPredicted RBP5.57□□□□□ -1.52
VTA1-202ENST00000367630 KNTC1P50748 2209 aa5.57□□□□□ -1.52
VTA1-202ENST00000367630 TRGV2A0A075B6R0 118 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 TSPAN13O95857 204 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 TRGV4A0A0C4DH28 118 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 INSL3P51460 131 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 ASPHD1Q5U4P2 390 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 SLC25A29Q8N8R3 303 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 RIF1Q5UIP0 2472 aaKnown RBP5.56□□□□□ -1.52
VTA1-202ENST00000367630 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 G3V318 75 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 TRBV10-2A0A0K0K1G8 114 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 PDE6GP18545 87 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 CD33P20138 364 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 APOC4P55056 127 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 LAMA2P24043 3122 aaKnown RBP5.56□□□□□ -1.52
VTA1-202ENST00000367630 IGKV3D-20A0A0C4DH25 116 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 IGHV4-39P01824 125 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 C9orf85Q96MD7 179 aa5.56□□□□□ -1.52
VTA1-202ENST00000367630 IGKV3-7A0A075B6H7 116 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 SMIM9A6NGZ8 99 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 CD24P25063 80 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 NRACQ8N912 160 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 IMUPQ9GZP8 106 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3-16A0A0C4DH30 117 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 A0A1B0GX51 115 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 K7EQG2 157 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 NDPQ00604 133 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3-49A0A0A0MS15 119 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 SAP30O75446 220 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 Q6Q795 121 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 LINC00322Q6ZN03 302 aaPredicted RBP5.55□□□□□ -1.52
VTA1-202ENST00000367630 TMEM219Q86XT9 240 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 LINC01561Q8N1V8 128 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 SHANK1Q9Y566 2161 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 TRBV30A0A0K0K1B3 111 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 K7EQD1 137 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 FAM110AQ9BQ89 295 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 TANC2Q9HCD6 1990 aa5.55□□□□□ -1.52
VTA1-202ENST00000367630 MKI67P46013 3256 aaKnown RBP5.55□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3OR16-13A0A075B7E8 117 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3-74A0A0B4J1X5 117 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 PRR30Q53SZ7 412 aaPredicted RBP5.54□□□□□ -1.52
VTA1-202ENST00000367630 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 SPATA25Q9BR10 227 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 CRIP1P50238 77 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 ANKRD29Q8N6D5 301 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 TMEM126AQ9H061 195 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 ZFAND2AQ8N6M9 145 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 MIAQ16674 131 aa5.54□□□□□ -1.52
VTA1-202ENST00000367630 DEFB131AP59861 70 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 UFSP1Q6NVU6 142 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 TMEM223A0PJW6 202 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
VTA1-202ENST00000367630 FOXI1Q12951 378 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 FGF6P10767 208 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 ZFP36P26651 326 aaKnown RBP5.53□□□□□ -1.52
VTA1-202ENST00000367630 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 PTPRZ1P23471 2315 aaPredicted RBP5.53□□□□□ -1.52
VTA1-202ENST00000367630 IGHV3OR16-10A0A075B7F0 116 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 SYNJ2BPP57105 145 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 PRIMA1Q86XR5 153 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 ALPK2Q86TB3 2170 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 C9JAW5 83 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 RUSC1-AS1Q66K80 236 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 Q6YL49 198 aa5.53□□□□□ -1.52
VTA1-202ENST00000367630 KLHL30-AS1Q8NEE0 82 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms