RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 ZNF295-AS1Q8N0V1 137 aa11.05□□□□□ -0.64
COL1A2-201ENST00000297268 PRAC2D3DTV9 90 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 K7ENP7 123 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 ODF1Q14990 250 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 MAPK1IP1LQ8NDC0 245 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 NUP210Q8TEM1 1887 aaPredicted RBP11.04□□□□□ -0.64
COL1A2-201ENST00000297268 IGHV7-81A0A0B4J1V7 117 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 WI2-2373I1.2A0A1W2PRP0 233 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 NBASA2RRP1 2371 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 CREBBPQ92793 2442 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 A0A0J9YXV3 536 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 NOTCH3Q9UM47 2321 aa11.04□□□□□ -0.64
COL1A2-201ENST00000297268 H3BUA1 57 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 ACYP1P07311 99 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 RNF223E7ERA6 249 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 CTRLP40313 264 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 TEX22C9J3V5 150 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 BUB3O43684 328 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 ICOSQ9Y6W8 199 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
COL1A2-201ENST00000297268 CRIP3Q6Q6R5 217 aa11.02□□□□□ -0.64
COL1A2-201ENST00000297268 DSCR8Q96T75 97 aa11.02□□□□□ -0.64
COL1A2-201ENST00000297268 ZNF561-AS1K7EIQ3 104 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
COL1A2-201ENST00000297268 PLA2G2CQ5R387 149 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 DEFB121Q5J5C9 76 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 SMIM20Q8N5G0 67 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 MED13Q9UHV7 2174 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 E9PLD3 99 aa11.02□□□□□ -0.65
COL1A2-201ENST00000297268 RPL39P62891 51 aaKnown RBP11.02□□□□□ -0.65
COL1A2-201ENST00000297268 OBSL1O75147 1896 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
COL1A2-201ENST00000297268 TRBV6-1A0A0K0K1D8 114 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 ATRXP46100 2492 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 GTF3C1Q12789 2109 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 PCNX1Q96RV3 2341 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 RBMY1FQ15415 496 aaKnown RBP11.01□□□□□ -0.65
COL1A2-201ENST00000297268 DKK4Q9UBT3 224 aa11.01□□□□□ -0.65
COL1A2-201ENST00000297268 CENPVL3A0A0U1RRI6 287 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 U3KQE9 123 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 BRWD1-AS2P59051 145 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 SLC25A29Q8N8R3 303 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 F5H768 121 aa11□□□□□ -0.65
COL1A2-201ENST00000297268 LINC00322Q6ZN03 302 aaPredicted RBP11□□□□□ -0.65
COL1A2-201ENST00000297268 TP73-AS1Q9UF72 201 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 IGKV1D-37A0A075B6S9 117 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 DAD1P61803 113 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 HERV-K104P63124 156 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 ORMDL1Q9P0S3 153 aa10.99□□□□□ -0.65
COL1A2-201ENST00000297268 CRYGCP07315 174 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 ELANEP08246 267 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 CLPSL2Q6UWE3 100 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 UBE2DNLQ8IWF7 75 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 TNRC6AQ8NDV7 1962 aaKnown RBP10.98□□□□□ -0.65
COL1A2-201ENST00000297268 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 WT1P19544 449 aaPredicted RBP10.98□□□□□ -0.65
COL1A2-201ENST00000297268 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
COL1A2-201ENST00000297268 A0A096LPF7 62 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 GRNP28799 593 aaKnown RBP10.97□□□□□ -0.65
COL1A2-201ENST00000297268 PTH2Q96A98 100 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 CDK2AP2O75956 126 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 ATP6V0E2Q8NHE4 81 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 PROP1O75360 226 aa10.97□□□□□ -0.65
COL1A2-201ENST00000297268 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.65
COL1A2-201ENST00000297268 TRAV26-1A0A087WT03 109 aa10.96□□□□□ -0.65
COL1A2-201ENST00000297268 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
COL1A2-201ENST00000297268 XCL1P47992 114 aa10.96□□□□□ -0.65
COL1A2-201ENST00000297268 MRAPQ8TCY5 172 aa10.96□□□□□ -0.65
COL1A2-201ENST00000297268 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
COL1A2-201ENST00000297268 DAND5Q8N907 189 aa10.96□□□□□ -0.66
COL1A2-201ENST00000297268 NKAPP1Q8N9T2 125 aa10.96□□□□□ -0.66
COL1A2-201ENST00000297268 TIMM17AQ99595 171 aa10.96□□□□□ -0.66
COL1A2-201ENST00000297268 MED13LQ71F56 2210 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 A0A0B4J2C4 111 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 IGLV1-47P01700 117 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 Q8N9W7 124 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 AJUBAQ96IF1 538 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 RNF114Q9Y508 228 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 ANGP03950 147 aaKnown RBP10.95□□□□□ -0.66
COL1A2-201ENST00000297268 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 TRBV10-2A0A0K0K1G8 114 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 ZNF106Q9H2Y7 1883 aaKnown RBP10.95□□□□□ -0.66
COL1A2-201ENST00000297268 MSMPQ1L6U9 139 aa10.95□□□□□ -0.66
COL1A2-201ENST00000297268 NCKAP5O14513 1909 aa10.94□□□□□ -0.66
COL1A2-201ENST00000297268 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
COL1A2-201ENST00000297268 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms