RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 IGHV3-73A0A0B4J1V6 119 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 ODF3BA8MYP8 253 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 F8VRH5 84 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 F8W735 103 aaPredicted RBP3.65□□□□□ -1.83
USP44-201ENST00000258499 CIDEAO60543 219 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 SLC25A16P16260 332 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 LINC01559Q495D7 138 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 C16orf54Q6UWD8 224 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 UNQ9165/PRO28630Q6UXU0 137 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 CEND1Q8N111 149 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 RNF185Q96GF1 192 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 LINC00477Q96M19 166 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 PRADC1Q9BSG0 188 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 C11orf21Q9P2W6 132 aa3.65□□□□□ -1.83
USP44-201ENST00000258499 TRAV12-2A0A075B6T6 113 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 OVOL1O14753 267 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 CCL19Q99731 98 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 A0A087WX48 190 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 SIVA1O15304 175 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 BLCAPP62952 87 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 WFDC2Q14508 124 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 KLHL30-AS1Q8NEE0 82 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 TP53TG1Q9Y2A0 90 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 PRSS29PA6NIE9 313 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 WIPF1O43516 503 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 FGF6P10767 208 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 GNLYP22749 145 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 SNRPD3P62318 126 aaKnown RBP3.64□□□□□ -1.83
USP44-201ENST00000258499 C12orf74Q32Q52 190 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 LYRM7Q5U5X0 104 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 MAPK1IP1LQ8NDC0 245 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 TSSC4Q9Y5U2 329 aaPredicted RBP3.64□□□□□ -1.83
USP44-201ENST00000258499 LRBAP50851 2863 aa3.64□□□□□ -1.83
USP44-201ENST00000258499 LRRK2Q5S007 2527 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 TRAV2A0A0B4J234 112 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 DGAT2L7PQ6IED9 249 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 C1orf122Q6ZSJ8 110 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 MAPKAPK5-AS1Q8N8E1 139 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 SYT8Q8NBV8 401 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 MRAP2Q96G30 205 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 SIGMAR1Q99720 223 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 CENPEQ02224 2701 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 PPP1R17O96001 155 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 ZNF48Q96MX3 618 aaPredicted RBP3.63□□□□□ -1.83
USP44-201ENST00000258499 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 ZFAND3Q9H8U3 227 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 JPT2Q9H910 190 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 KLK9Q9UKQ9 250 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 U3KQK5 164 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 ABCA2Q9BZC7 2435 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 IGHV1-69DA0A0B4J2H0 117 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
USP44-201ENST00000258499 DUSP14O95147 198 aaKnown RBP3.63□□□□□ -1.83
USP44-201ENST00000258499 IGHV1-69P01742 117 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 IGHV4-38-2P0DP08 117 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 NBL1P41271 181 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 SPINK13Q1W4C9 94 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 RAX2Q96IS3 184 aa3.63□□□□□ -1.83
USP44-201ENST00000258499 DAZ1Q9NQZ3 744 aaKnown RBP3.63□□□□□ -1.83
USP44-201ENST00000258499 RBAKDNA6NC62 111 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 SDHAF1A6NFY7 115 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 FAM223BA6NKX1 122 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 IGLL5B9A064 214 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 FAM223AQ8IWN6 122 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 C5orf56Q8N8D9 126 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 AGRNO00468 2067 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 TRAV8-2A0A0B4J237 113 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 IGHV4-61A0A0C4DH41 118 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 KNCNA6PVL3 124 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 IGHG4P01861 327 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 RPL39P62891 51 aaKnown RBP3.62□□□□□ -1.83
USP44-201ENST00000258499 PRR9Q5T870 116 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 C20orf173Q96LM9 149 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 A0A1W2PPR1 153 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 SYNJ2BPP57105 145 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 NPC2P61916 151 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 ZNF876PQ49A33 203 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 Q5PR19 223 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 VCX2Q9H322 139 aa3.62□□□□□ -1.83
USP44-201ENST00000258499 A0A0U1RRA0 63 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 NDUFA4O00483 81 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 VCYO14598 125 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 AZU1P20160 251 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 C9orf47Q6ZRZ4 202 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 GATD1Q8NB37 220 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 HHLA3Q9XRX5 114 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 SMG1Q96Q15 3661 aaKnown RBP3.61□□□□□ -1.83
USP44-201ENST00000258499 CLPSL1A2RUU4 121 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 NDUFS8O00217 210 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 LMO4P61968 165 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 Q8N6K4 173 aa3.61□□□□□ -1.83
USP44-201ENST00000258499 DLX4Q92988 240 aaPredicted RBP3.61□□□□□ -1.83
USP44-201ENST00000258499 AJUBAQ96IF1 538 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms