RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 IGHV4-38-2P0DP08 117 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 EVI2AP22794 236 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 ATP5J2P56134 94 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 LY6EQ16553 131 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 TMEM97Q5BJF2 176 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 BOD1L2Q8IYS8 172 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 MRAP2Q96G30 205 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 UFC1Q9Y3C8 167 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 TRAV21A0A0B4J279 112 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 A1L4Q6 167 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 H3BVH4 76 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 SOCS3O14543 225 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 TRBV12-3P01733 135 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 MSMBP08118 114 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 MED14OSP0DP75 135 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 GATA1P15976 413 aaPredicted RBP6.14□□□□□ -1.43
GPC3-204ENST00000631057 ZNF843Q8N446 348 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 NRACQ8N912 160 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 OR4C5Q8NGB2 326 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 OR4X2Q8NGF9 303 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 TMEM158Q8WZ71 300 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 C18orf15Q96N68 181 aa6.14□□□□□ -1.43
GPC3-204ENST00000631057 CSPG4Q6UVK1 2322 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 SPG11Q96JI7 2443 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 TRBV7-9A0A0J9YWB2 115 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 A6NDN8 102 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 PRSS1P07477 247 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 HSD52Q0P140 79 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 LAGE3Q14657 143 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 PRR9Q5T870 116 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 SAMD13Q5VXD3 122 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 UNQ9165/PRO28630Q6UXU0 137 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 GPHB5Q86YW7 130 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 ZFAND2AQ8N6M9 145 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 DKK2Q9UBU2 259 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 ZNF580Q9UK33 172 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 ITPR1Q14643 2758 aa6.13□□□□□ -1.43
GPC3-204ENST00000631057 IGHV4-30-2A0A087WSY4 118 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 CBY3A6NI87 242 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 DPM2O94777 84 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 IGLV1-40P01703 118 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 IGHV3-11P01762 117 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 IGKCP01834 107 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 SMIM17P0DL12 118 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 ASIPP42127 132 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 NMUP48645 174 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 DSCR9P59020 149 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 MYOZ3Q8TDC0 251 aa6.12□□□□□ -1.43
GPC3-204ENST00000631057 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
GPC3-204ENST00000631057 PEF1Q9UBV8 284 aaKnown RBP6.12□□□□□ -1.43
GPC3-204ENST00000631057 CSMD1Q96PZ7 3565 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 DOPEY1Q5JWR5 2465 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 C7orf71A4D174 169 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 B4DSR2 109 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 K7EMT4 169 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 K7EP13 123 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 HLA-DRB4P13762 266 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 GATA3P23771 443 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 S100A4P26447 101 aaKnown RBP6.11□□□□□ -1.43
GPC3-204ENST00000631057 SRSF1Q07955 248 aaKnown RBP eCLIP6.11□□□□□ -1.435e-7■■■■■ 29.3
GPC3-204ENST00000631057 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 APRG1Q8IVJ8 170 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 FAM19A4Q96LR4 140 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 FOXC2Q99958 501 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 KLK15Q9H2R5 256 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 DAZ1Q9NQZ3 744 aaKnown RBP6.11□□□□□ -1.43
GPC3-204ENST00000631057 CBY1Q9Y3M2 126 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 HLA-DRB4X5D2U9 266 aa6.11□□□□□ -1.43
GPC3-204ENST00000631057 TRAV26-2A0A0B4J265 109 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 K7EMI3 77 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 ID1P41134 155 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 Q6ZQT7 251 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 PCP2Q8IVA1 136 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 RHPN1-AS1Q9BWJ2 59 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 DPH3P1Q9H4G8 78 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 HIGD1BQ9P298 99 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 PHLDA3Q9Y5J5 127 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 MUC4Q99102 2169 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 H3BRM9 83 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 M0R381 172 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 PPP1R17O96001 155 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 PRB1P04280 392 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 SLC25A16P16260 332 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 RNASE4P34096 147 aaKnown RBP6.1□□□□□ -1.43
GPC3-204ENST00000631057 BLCAPP62952 87 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 CFHR3Q02985 330 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 AP1S3Q96PC3 154 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 JMJD8Q96S16 334 aa6.1□□□□□ -1.43
GPC3-204ENST00000631057 USP24Q9UPU5 2620 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms