RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 MRPS16Q9Y3D3 137 aaKnown RBP8.36□□□□□ -1.07
LIG1-217ENST00000599165 BORCS7-ASMTA0A0B4J1R7 106 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 TNP2Q05952 138 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 FAM159AQ6UWV7 190 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 TMEM75Q8N9X5 138 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 LINC00479Q96M42 142 aa8.35□□□□□ -1.07
LIG1-217ENST00000599165 TRGV11A0A075B6L2 103 aa8.34□□□□□ -1.07
LIG1-217ENST00000599165 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
LIG1-217ENST00000599165 A0A1W2PRE2 83 aa8.34□□□□□ -1.07
LIG1-217ENST00000599165 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
LIG1-217ENST00000599165 SPXQ9BT56 116 aa8.34□□□□□ -1.07
LIG1-217ENST00000599165 PRO0255Q9UI72 69 aa8.34□□□□□ -1.07
LIG1-217ENST00000599165 HSPG2P98160 4391 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 TRAV34A0A0B4J273 112 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 FAM74A7A6NL05 159 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 PAX4O43316 350 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 APOBP04114 4563 aaKnown RBP8.33□□□□□ -1.08
LIG1-217ENST00000599165 FHITP49789 147 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 FLI1Q01543 452 aaPredicted RBP8.33□□□□□ -1.08
LIG1-217ENST00000599165 IQCF2Q8IXL9 164 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 KCNRGQ8N5I3 272 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 HHLA3Q9XRX5 114 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 PCLOQ9Y6V0 5065 aa8.33□□□□□ -1.08
LIG1-217ENST00000599165 M0R2P5 195 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 TAAR5O14804 337 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 GCGP01275 180 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 UBE2G2P60604 165 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 ZNF345Q14585 488 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 DPPA3Q6W0C5 159 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 ZNF575Q86XF7 245 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
LIG1-217ENST00000599165 TRAV4A0A0B4J268 109 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 IGKV3D-20A0A0C4DH25 116 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 MAP1LC3B2A6NCE7 125 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 PFN1P07737 140 aaKnown RBP8.31□□□□□ -1.08
LIG1-217ENST00000599165 SOHLH1Q5JUK2 328 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 AKR1C8PQ5T2L2 129 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 SDF2L1Q9HCN8 221 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
LIG1-217ENST00000599165 LOC100131303A0A0U1RQF7 123 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 HMSDA8MTL9 139 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 K7EQD1 137 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 PEX7O00628 323 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 RNASE3P12724 160 aaKnown RBP8.3□□□□□ -1.08
LIG1-217ENST00000599165 CRIP1P50238 77 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
LIG1-217ENST00000599165 Q86TA4 180 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 NDFIP1Q9BT67 221 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 ARL2-SNX15V9GYD0 113 aa8.3□□□□□ -1.08
LIG1-217ENST00000599165 TRGV4A0A0C4DH28 118 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 A0A1W2PPQ1 181 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 NXPH4O95158 308 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 SLAQ13239 276 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 SMUG1Q53HV7 270 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 KRTAP17-1Q9BYP8 105 aa8.29□□□□□ -1.08
LIG1-217ENST00000599165 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 FBLL1A6NHQ2 334 aaKnown RBP8.28□□□□□ -1.08
LIG1-217ENST00000599165 K7EQM0 130 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 RS1O15537 224 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 GYPEP15421 78 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
LIG1-217ENST00000599165 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
LIG1-217ENST00000599165 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 OR4C5Q8NGB2 326 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
LIG1-217ENST00000599165 SIVA1O15304 175 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 BCL2L11O43521 198 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 IFNA7P01567 189 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 SEC11BP0C7V7 166 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 LINC00315P59091 139 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 ZNF876PQ49A33 203 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 ZNF506Q5JVG8 444 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 SAPCD1Q5SSQ6 148 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 HIST1H2BAQ96A08 127 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 PTH2Q96A98 100 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 TNFRSF18Q9Y5U5 241 aa8.27□□□□□ -1.09
LIG1-217ENST00000599165 A0A0D9SG52 128 aa8.26□□□□□ -1.09
LIG1-217ENST00000599165 C9JCJ5 164 aa8.26□□□□□ -1.09
LIG1-217ENST00000599165 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
LIG1-217ENST00000599165 Q6ZSN1 163 aa8.26□□□□□ -1.09
LIG1-217ENST00000599165 WFDC10BQ8IUB3 73 aa8.26□□□□□ -1.09
LIG1-217ENST00000599165 TRBV6-1A0A0K0K1D8 114 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 PAGE4O60829 102 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 ORM1P02763 201 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 SRIP30626 198 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 ZFP69Q49AA0 526 aa8.25□□□□□ -1.09
LIG1-217ENST00000599165 SLC25A29Q8N8R3 303 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms