RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 OR8B8Q15620 311 aa0.88□□□□□ -2.27
PRKDC-205ENST00000535375 ASB16-AS1Q495Z4 193 aa0.88□□□□□ -2.27
PRKDC-205ENST00000535375 SPANXA1Q9NS26 97 aa0.88□□□□□ -2.27
PRKDC-205ENST00000535375 NEBP20929 6669 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 CREBBPQ92793 2442 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 SLC25A5P05141 298 aaKnown RBP0.87□□□□□ -2.27
PRKDC-205ENST00000535375 SCGB1A1P11684 91 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 OCIAD2Q56VL3 154 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 C5orf17Q8NAS9 161 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 PYDC1Q8WXC3 89 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 LPAR5Q9H1C0 372 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 FGD6Q6ZV73 1430 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 NSD1Q96L73 2696 aaPredicted RBP0.87□□□□□ -2.27
PRKDC-205ENST00000535375 NBEAQ8NFP9 2946 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 EP400Q96L91 3159 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 DSPPQ9NZW4 1301 aa0.87□□□□□ -2.27
PRKDC-205ENST00000535375 WDR97A6NE52 1622 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 NBEAL1Q6ZS30 2694 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 CHD3Q12873 2000 aaKnown RBP0.86□□□□□ -2.27
PRKDC-205ENST00000535375 A0A1W2PPM0 123 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 DPM2O94777 84 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 SDC4P31431 198 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 FXYD4P59646 89 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 DNAJB13P59910 316 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 NEDD8Q15843 81 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 OR8I2Q8N0Y5 310 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 SPANXCQ9NY87 97 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 ATRQ13535 2644 aa0.86□□□□□ -2.27
PRKDC-205ENST00000535375 MUC5BQ9HC84 5762 aaPredicted RBP0.86□□□□□ -2.27
PRKDC-205ENST00000535375 USP9YO00507 2555 aaPredicted RBP0.86□□□□□ -2.27
PRKDC-205ENST00000535375 AKAP13Q12802 2813 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 HMGXB3Q12766 1538 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 XIRP1Q702N8 1843 aaKnown RBP0.85□□□□□ -2.27
PRKDC-205ENST00000535375 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
PRKDC-205ENST00000535375 IFITM5A6NNB3 132 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 TNFSF15O95150 251 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
PRKDC-205ENST00000535375 TCTEX1D1Q8N7M0 179 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 TEX15Q9BXT5 2789 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 GOLGB1Q14789 3259 aaKnown RBP0.85□□□□□ -2.27
PRKDC-205ENST00000535375 CELSR1Q9NYQ6 3014 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
PRKDC-205ENST00000535375 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
PRKDC-205ENST00000535375 MUC3AQ02505 3323 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 BORCS7-ASMTA0A0B4J1R7 106 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 A0A1B0GW64 132 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 C9JAW5 83 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 TCRAP04437 139 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 ETV6P41212 452 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 QRFPP83859 136 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 C10orf111Q8N326 155 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 HIGD1AQ9Y241 93 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 LAMA3Q16787 3333 aa0.84□□□□□ -2.27
PRKDC-205ENST00000535375 MXRA5Q9NR99 2828 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 TANC2Q9HCD6 1990 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 MUC4Q99102 2169 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 CTTNBP2Q8WZ74 1663 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 ASCC3Q8N3C0 2202 aaKnown RBP0.84□□□□□ -2.28
PRKDC-205ENST00000535375 ITPR1Q14643 2758 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 CEP250Q9BV73 2442 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
PRKDC-205ENST00000535375 TLN1Q9Y490 2541 aaKnown RBP0.83□□□□□ -2.28
PRKDC-205ENST00000535375 EML5Q05BV3 1969 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 KIAA1549LQ6ZVL6 1849 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 CITO14578 2027 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 FAM208BQ5VWN6 2430 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 LOC107984156A0A0G2JMH3 177 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 A0A1W2PPB8 328 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 A0A1W2PRS3 328 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 ZNF727A8MUV8 499 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 KIR3DP1A8MWS1 328 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 K7EIL1 84 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 RPL37AP61513 92 aaKnown RBP0.83□□□□□ -2.28
PRKDC-205ENST00000535375 MORN2Q502X0 79 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 ARL17AQ8IVW1 177 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 OTOSQ8NHW6 89 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 BOKQ9UMX3 212 aaPredicted RBP0.83□□□□□ -2.28
PRKDC-205ENST00000535375 ZFHX3Q15911 3703 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 MED12Q93074 2177 aa0.83□□□□□ -2.28
PRKDC-205ENST00000535375 HTTP42858 3142 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 ARHGAP31Q2M1Z3 1444 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 PTPRDP23468 1912 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 USP34Q70CQ2 3546 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 MT-ND4LP03901 98 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 GYPBP06028 91 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 GTF2A1P52655 376 aaPredicted RBP0.82□□□□□ -2.28
PRKDC-205ENST00000535375 ALX1Q15699 326 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 CCDC153Q494R4 210 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 HSD17B12Q53GQ0 312 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 TMEM244Q5VVB8 128 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 DEFB132Q7Z7B7 95 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 ZFC3H1O60293 1989 aaKnown RBP0.82□□□□□ -2.28
PRKDC-205ENST00000535375 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 STAB2Q8WWQ8 2551 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 BSNQ9UPA5 3926 aa0.82□□□□□ -2.28
PRKDC-205ENST00000535375 GVINP1Q7Z2Y8 2422 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms