RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NXT2Q9NPJ8 142 aaKnown RBP5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 OSTCQ9NRP0 149 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 POLEQ07864 2286 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 CSMD1Q96PZ7 3565 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 IGKV1OR2-108A0A075B7D4 117 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 UPK2O00526 184 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 MYCNOSP40205 109 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRR20EP86478 221 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRR20CP86479 221 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRR20DP86480 221 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRR20BP86481 221 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRR20AP86496 221 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PRCDQ00LT1 54 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 PQLC2Q6ZP29 291 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 C16orf92Q96LL3 132 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 HIST1H4GQ99525 98 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF747Q9BV97 191 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 CTSZQ9UBR2 303 aa5.83□□□□□ -1.48
PDLIM5-219ENST00000514743 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 SHISA9B4DS77 424 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 C9JCJ5 164 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TCL1BO95988 128 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 EFNA4P52798 201 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 MLANAQ16655 118 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TMEM200BQ69YZ2 307 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 LYPD2Q6UXB3 125 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TXNDC17Q9BRA2 123 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 MRPL20Q9BYC9 149 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TTTY13Q9BZ97 58 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 LY96Q9Y6Y9 160 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TRBV25-1A0A075B6N4 114 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 SAA1P0DJI8 122 aaPredicted RBP5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF138P52744 262 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 VMA21Q3ZAQ7 101 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 PRIMA1Q86XR5 153 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 AGPAT4-IT1Q9H0P7 198 aa5.82□□□□□ -1.48
PDLIM5-219ENST00000514743 TPRP12270 2363 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 E7EUB6 86 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 TIMM23O14925 209 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 HOXA3O43365 443 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 IGHV3-48P01763 117 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 CENPWQ5EE01 88 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 GFRALQ6UXV0 394 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 ZFP2Q6ZN57 461 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 SHANK2-AS3Q9BTD1 123 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 ACACAQ13085 2346 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 LEPP41159 167 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 HIST2H2BCQ6DN03 193 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 HIST2H2BDQ6DRA6 164 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 SBSPONQ8IVN8 264 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 POM121L12Q8N7R1 296 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 NTN5Q8WTR8 489 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF714Q96N38 554 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 APC2O95996 2303 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 E7EQL1 145 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 SLC25A20O43772 301 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 AVPP01185 164 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 ATP5G1P05496 136 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 RNASE2P10153 161 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 LOXP28300 417 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 LGALS9BQ3B8N2 356 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 LGALS9CQ6DKI2 356 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 MIR17HGQ75NE6 70 aa5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 RNASE6Q93091 150 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-219ENST00000514743 ZFHX3Q15911 3703 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 MRGPRG-AS1Q2M3A8 158 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 C2orf83Q53S99 150 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 Q8N1Y9 231 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF503Q96F45 646 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 VKORC1Q9BQB6 163 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 NAV3Q8IVL0 2385 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 ABCA1O95477 2261 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 IGLV2-23P01705 113 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 TMEM158Q8WZ71 300 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 NDUFA4L2Q9NRX3 87 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 CD24P25063 80 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 CCL17Q92583 94 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF414Q96IQ9 312 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 FANCD2OSQ96PS1 177 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 NABP2Q9BQ15 211 aa5.8□□□□□ -1.48
PDLIM5-219ENST00000514743 CEP295Q9C0D2 2601 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 PLXNB1O43157 2135 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 TRAV41A0A0B4J266 112 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 INS-IGF2F8WCM5 200 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 ZNF137PP52743 207 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 CD69Q07108 199 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 OTORQ9NRC9 128 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 KAAG1Q9UBP8 84 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 SVEP1Q4LDE5 3571 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 PGPA6NDG6 321 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 LINC01549A6NIU2 74 aa5.79□□□□□ -1.48
PDLIM5-219ENST00000514743 C11orf52Q96A22 123 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms