RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NBEAL2Q6ZNJ1 2754 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 SAP30O75446 220 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 APOMO95445 188 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
GPC1-209ENST00000495100 IGKV3D-20A0A0C4DH25 116 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 KNCNA6PVL3 124 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
GPC1-209ENST00000495100 PSMG4Q5JS54 123 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 OR4X2Q8NGF9 303 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 SCGB3A1Q96QR1 104 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 MRPL35Q9NZE8 188 aaKnown RBP10.38□□□□□ -0.75
GPC1-209ENST00000495100 KLK9Q9UKQ9 250 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 CYSLTR1Q9Y271 337 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 CENPVL3A0A0U1RRI6 287 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 MRPS16Q9Y3D3 137 aaKnown RBP10.38□□□□□ -0.75
GPC1-209ENST00000495100 M0R1W7 72 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 BUB3O43684 328 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 PRM2P04554 102 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 ZNF56Q15929 161 aa10.38□□□□□ -0.75
GPC1-209ENST00000495100 IGHV2-70DA0A0C4DH43 119 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 IGF2-ASQ6U949 168 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 A6NDN8 102 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 LY6LH3BQJ8 138 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 DEFB136Q30KP8 78 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 CCDC140Q96MF4 163 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 GFRA4Q9GZZ7 299 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 IGHV4-39P01824 125 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 CT83Q5H943 113 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 TMEM170BQ5T4T1 132 aa10.37□□□□□ -0.75
GPC1-209ENST00000495100 IGHV4-30-2A0A087WSY4 118 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
GPC1-209ENST00000495100 UCNP55089 124 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 PLP1P60201 277 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 ORAOV1Q8WV07 137 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 WI2-2373I1.2A0A1W2PRP0 233 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 UBE2E1P51965 193 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 ANXA2RQ3ZCQ2 193 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 FAM159AQ6UWV7 190 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
GPC1-209ENST00000495100 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
GPC1-209ENST00000495100 C8orf31Q8N9H6 132 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 RNF5Q99942 180 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
GPC1-209ENST00000495100 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 SFTPCP11686 197 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 NPFFR1Q9GZQ6 430 aa10.35□□□□□ -0.75
GPC1-209ENST00000495100 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
GPC1-209ENST00000495100 INS-IGF2F8WCM5 200 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 SYNJ2BPP57105 145 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 NPC2P61916 151 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 Q6AWC8 147 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 ZFHX3Q15911 3703 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 IGKCP01834 107 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 SPINK13Q1W4C9 94 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 LYPD1Q8N2G4 141 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
GPC1-209ENST00000495100 COX8AP10176 69 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 ASIPP42127 132 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 RPS20P60866 119 aaKnown RBP10.33□□□□□ -0.76
GPC1-209ENST00000495100 PDE6HQ13956 83 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 NPBQ8NG41 125 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 USP24Q9UPU5 2620 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
GPC1-209ENST00000495100 IGHV4-59P01825 116 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 FABP2P12104 132 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 PRR9Q5T870 116 aa10.33□□□□□ -0.76
GPC1-209ENST00000495100 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
GPC1-209ENST00000495100 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
GPC1-209ENST00000495100 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 GTF2H5Q6ZYL4 71 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 CST9LQ9H4G1 147 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 MOB4Q9Y3A3 225 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 MINOS1Q5TGZ0 78 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 LY6G5BQ8NDX9 201 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 MINOS1-NBL1R4GNA1 71 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 OR11H12B2RN74 326 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 PRSS2P07478 247 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 FXYD2P54710 66 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 LMO4P61968 165 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 LINC01545Q5VT33 79 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 C20orf173Q96LM9 149 aa10.32□□□□□ -0.76
GPC1-209ENST00000495100 DPM2O94777 84 aa10.31□□□□□ -0.76
GPC1-209ENST00000495100 OR1N2Q8NGR9 330 aa10.31□□□□□ -0.76
GPC1-209ENST00000495100 CSTL1Q9H114 145 aa10.31□□□□□ -0.76
GPC1-209ENST00000495100 LAGE3Q14657 143 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms