RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 PQLC2Q6ZP29 291 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 CMTM2Q8TAZ6 248 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 RAB24Q969Q5 203 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 ZNF479Q96JC4 524 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 AQP10Q96PS8 301 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 HHLA3Q9XRX5 114 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 LENEPQ9Y5L5 61 aa5.86□□□□□ -1.47
LRCH3-219ENST00000494069 IGHV3-16A0A0C4DH30 117 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 STAG3L2P0CL84 134 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 STAG3L3P0CL85 134 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 GCHFRP30047 84 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 CDC34P49427 236 aaPredicted RBP5.85□□□□□ -1.47
LRCH3-219ENST00000494069 RPL7L1Q6DKI1 246 aaKnown RBP5.85□□□□□ -1.47
LRCH3-219ENST00000494069 FAM159AQ6UWV7 190 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 OR2G3Q8NGZ4 309 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 TMED6Q8WW62 240 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 TREM1Q9NP99 234 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 PRO0255Q9UI72 69 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 ICOSQ9Y6W8 199 aa5.85□□□□□ -1.47
LRCH3-219ENST00000494069 TRGV4A0A0C4DH28 118 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 RNF222A6NCQ9 220 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 C16orf90A8MZG2 172 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 GGTLC3B5MD39 225 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 TYMSP04818 313 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 ZNF80P51504 273 aaPredicted RBP5.84□□□□□ -1.47
LRCH3-219ENST00000494069 FAM74A1Q5RGS3 127 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 LYPD5Q6UWN5 251 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 SUN5Q8TC36 379 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 RASL10AQ92737 203 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 C11orf21Q9P2W6 132 aa5.84□□□□□ -1.47
LRCH3-219ENST00000494069 TRGV11A0A075B6L2 103 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 FXYD6-FXYD2A0A087WZ82 144 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TRAV21A0A0B4J279 112 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 G3V3Q6 166 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 NXPH4O95158 308 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 IGLV2-11P01706 119 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TCRAP04437 139 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 GIPP09681 153 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-219ENST00000494069 FUSP35637 526 aaKnown RBP eCLIP5.83□□□□□ -1.48
LRCH3-219ENST00000494069 LINC00315P59091 139 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 SUMO1P63165 101 aaKnown RBP5.83□□□□□ -1.48
LRCH3-219ENST00000494069 ZNF726P1Q15940 193 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TTC32Q5I0X7 151 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 SPATA12Q7Z6I5 190 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 ARL6IP6Q8N6S5 226 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TMEM75Q8N9X5 138 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 LINC00479Q96M42 142 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 PSMG3Q9BT73 122 aaPredicted RBP5.83□□□□□ -1.48
LRCH3-219ENST00000494069 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 PSG8Q9UQ74 426 aa5.83□□□□□ -1.48
LRCH3-219ENST00000494069 A0A1W2PPQ1 181 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 K7EQD1 137 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 M0R2P5 195 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 SIVA1O15304 175 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 GYPEP15421 78 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 SERF2P84101 59 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 SLAQ13239 276 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 MRPL23Q16540 153 aaKnown RBP5.82□□□□□ -1.48
LRCH3-219ENST00000494069 DPPA3Q6W0C5 159 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 Q6ZRN7 208 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-219ENST00000494069 PRNTQ86SH4 94 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 IQCF2Q8IXL9 164 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 C5orf17Q8NAS9 161 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 OR2T35Q8NGX2 323 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 SPXQ9BT56 116 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 ACTR3CQ9C0K3 210 aaPredicted RBP5.82□□□□□ -1.48
LRCH3-219ENST00000494069 SDF2L1Q9HCN8 221 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 EPDR1Q9UM22 224 aa5.82□□□□□ -1.48
LRCH3-219ENST00000494069 TRAV4A0A0B4J268 109 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 C9JCJ5 164 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 SMLR1H3BR10 107 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 CXorf1O96002 111 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 GCGP01275 180 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 MBP02144 154 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 FGF8P55075 233 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-219ENST00000494069 NEGR1Q7Z3B1 354 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 WFDC10BQ8IUB3 73 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 INO80EQ8NBZ0 244 aaPredicted RBP5.81□□□□□ -1.48
LRCH3-219ENST00000494069 OR4C5Q8NGB2 326 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 ASB13Q8WXK3 278 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
LRCH3-219ENST00000494069 IGHV3-73A0A0B4J1V6 119 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 SRIP30626 198 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 UBE2G2P60604 165 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 FLI1Q01543 452 aaPredicted RBP5.8□□□□□ -1.48
LRCH3-219ENST00000494069 NDFIP1Q9BT67 221 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 CYTL1Q9NRR1 136 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 TMEM167BQ9NRX6 74 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 FAT1Q14517 4588 aa5.8□□□□□ -1.48
LRCH3-219ENST00000494069 BORCS7-ASMTA0A0B4J1R7 106 aa5.79□□□□□ -1.48
LRCH3-219ENST00000494069 IGKV3D-20A0A0C4DH25 116 aa5.79□□□□□ -1.48
LRCH3-219ENST00000494069 SERTM2A0A1B0GWG4 89 aa5.79□□□□□ -1.48
LRCH3-219ENST00000494069 ARPC5O15511 151 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms