RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 NXPH4O95158 308 aa12.31□□□□□ -0.44
HMGN1-219ENST00000491183 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-219ENST00000491183 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
HMGN1-219ENST00000491183 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
HMGN1-219ENST00000491183 ASB13Q8WXK3 278 aa12.31□□□□□ -0.44
HMGN1-219ENST00000491183 C11orf21Q9P2W6 132 aa12.31□□□□□ -0.44
HMGN1-219ENST00000491183 RYR1P21817 5038 aa12.31□□□□□ -0.44
HMGN1-219ENST00000491183 SERTM2A0A1B0GWG4 89 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 GGTLC3B5MD39 225 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 K7EQD1 137 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 M0R2P5 195 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 IGLV2-11P01706 119 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
HMGN1-219ENST00000491183 NEGR1Q7Z3B1 354 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 INO80EQ8NBZ0 244 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-219ENST00000491183 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-219ENST00000491183 EPDR1Q9UM22 224 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
HMGN1-219ENST00000491183 FXYD6-FXYD2A0A087WZ82 144 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 G3V3Q6 166 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 CXorf1O96002 111 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 LINC00315P59091 139 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 Q6ZRN7 208 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-219ENST00000491183 KCNS1Q96KK3 526 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 SDF2L1Q9HCN8 221 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 TMEM167BQ9NRX6 74 aa12.29□□□□□ -0.44
HMGN1-219ENST00000491183 GYPEP15421 78 aa12.28□□□□□ -0.44
HMGN1-219ENST00000491183 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
HMGN1-219ENST00000491183 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
HMGN1-219ENST00000491183 OR2T35Q8NGX2 323 aa12.28□□□□□ -0.44
HMGN1-219ENST00000491183 NDFIP1Q9BT67 221 aa12.28□□□□□ -0.44
HMGN1-219ENST00000491183 KRTAP10-2P60368 255 aa12.27□□□□□ -0.45
HMGN1-219ENST00000491183 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-219ENST00000491183 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
HMGN1-219ENST00000491183 BORCS7-ASMTA0A0B4J1R7 106 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 K7EQM0 130 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 GCGP01275 180 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 ORM1P02763 201 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 SRIP30626 198 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 PRNTQ86SH4 94 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 KRTAP4-5Q9BYR2 181 aa12.26□□□□□ -0.45
HMGN1-219ENST00000491183 LRP1BQ9NZR2 4599 aa12.25□□□□□ -0.45
HMGN1-219ENST00000491183 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
HMGN1-219ENST00000491183 TAAR5O14804 337 aa12.25□□□□□ -0.45
HMGN1-219ENST00000491183 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
HMGN1-219ENST00000491183 LINC00479Q96M42 142 aa12.25□□□□□ -0.45
HMGN1-219ENST00000491183 C9JCJ5 164 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 CDK2AP2O75956 126 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
HMGN1-219ENST00000491183 SMUG1Q53HV7 270 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 DPPA3Q6W0C5 159 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 WFDC10BQ8IUB3 73 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 PCNPQ8WW12 178 aaKnown RBP12.24□□□□□ -0.45
HMGN1-219ENST00000491183 CYTL1Q9NRR1 136 aa12.24□□□□□ -0.45
HMGN1-219ENST00000491183 TRAV34A0A0B4J273 112 aa12.23□□□□□ -0.45
HMGN1-219ENST00000491183 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
HMGN1-219ENST00000491183 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-219ENST00000491183 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
HMGN1-219ENST00000491183 ZNF876PQ49A33 203 aa12.23□□□□□ -0.45
HMGN1-219ENST00000491183 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
HMGN1-219ENST00000491183 FBLL1A6NHQ2 334 aaKnown RBP12.22□□□□□ -0.45
HMGN1-219ENST00000491183 RS1O15537 224 aa12.22□□□□□ -0.45
HMGN1-219ENST00000491183 RNASE3P12724 160 aaKnown RBP12.22□□□□□ -0.45
HMGN1-219ENST00000491183 FGF8P55075 233 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-219ENST00000491183 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
HMGN1-219ENST00000491183 TXNDC17Q9BRA2 123 aa12.22□□□□□ -0.45
HMGN1-219ENST00000491183 HSPG2P98160 4391 aa12.22□□□□□ -0.45
HMGN1-219ENST00000491183 PGPEP1LA6NFU8 196 aa12.21□□□□□ -0.45
HMGN1-219ENST00000491183 UBE2G2P60604 165 aa12.21□□□□□ -0.45
HMGN1-219ENST00000491183 CFAP126Q5VTH2 177 aa12.21□□□□□ -0.45
HMGN1-219ENST00000491183 PTH2Q96A98 100 aa12.21□□□□□ -0.45
HMGN1-219ENST00000491183 LY96Q9Y6Y9 160 aa12.21□□□□□ -0.45
HMGN1-219ENST00000491183 TRAV9-2A0A087WT02 112 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 IGKV3D-20A0A0C4DH25 116 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 FAM74A7A6NL05 159 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 ARPC5O15511 151 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 IFNA7P01567 189 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 ZFP69Q49AA0 526 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 ARL2-SNX15V9GYD0 113 aa12.2□□□□□ -0.46
HMGN1-219ENST00000491183 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
HMGN1-219ENST00000491183 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
HMGN1-219ENST00000491183 ZNF506Q5JVG8 444 aa12.19□□□□□ -0.46
HMGN1-219ENST00000491183 AKR1C8PQ5T2L2 129 aa12.19□□□□□ -0.46
HMGN1-219ENST00000491183 PEX7O00628 323 aa12.18□□□□□ -0.46
HMGN1-219ENST00000491183 CIDEAO60543 219 aa12.18□□□□□ -0.46
HMGN1-219ENST00000491183 SH2D6Q7Z4S9 175 aa12.18□□□□□ -0.46
HMGN1-219ENST00000491183 NHLRC2Q8NBF2 726 aa12.18□□□□□ -0.46
HMGN1-219ENST00000491183 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 TRBV6-4A0A1B0GX49 114 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 FABP5P3A8MUU1 101 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 EVI2AP22794 236 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
HMGN1-219ENST00000491183 CRIP1P50238 77 aa12.17□□□□□ -0.46
HMGN1-219ENST00000491183 TIRAPP58753 221 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms