RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 GPHB5Q86YW7 130 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 KLHDC1Q8N7A1 406 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 FER1L6-AS1Q8NA97 138 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 PGLYRP4Q96LB8 373 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 LINC00477Q96M19 166 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 NDUFAF3Q9BU61 184 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 VAMP8Q9BV40 100 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 HSPB8Q9UJY1 196 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 WNK2Q9Y3S1 2297 aa4.32□□□□□ -1.72
HDAC8-216ENST00000470998 IGKV2-40A0A087WW87 121 aaPredicted RBP4.31□□□□□ -1.72
HDAC8-216ENST00000470998 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 M0QZ24 198 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 CRXO43186 299 aaPredicted RBP4.31□□□□□ -1.72
HDAC8-216ENST00000470998 SPINK4O60575 86 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 IGKV2D-40P01614 121 aaPredicted RBP4.31□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV3-23P01764 117 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 IGLC6P0CF74 106 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 PF4V1P10720 104 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 PSMB8P28062 276 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 ID1P41134 155 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 CACNG7P62955 275 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 C9orf152Q5JTZ5 239 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 Q6ZWC4 215 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 SMIM15Q7Z3B0 74 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 RNF152Q8N8N0 203 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 OR10J6PQ8NGY7 276 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 ODF3Q96PU9 254 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 CITED1Q99966 193 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 TMEM191AQ9H0A3 160 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 C16orf95Q9H693 158 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 PEF1Q9UBV8 284 aaKnown RBP4.31□□□□□ -1.72
HDAC8-216ENST00000470998 SMAD5-AS1Q9Y6J3 95 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 S4R3C0 116 aa4.31□□□□□ -1.72
HDAC8-216ENST00000470998 ARHGAP32A7KAX9 2087 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV7-4-1A0A0J9YVY3 117 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 B5MCH6 92 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 M0R2Z0 102 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 LGALS9O00182 355 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 SNRPCP09234 159 aaKnown RBP4.3□□□□□ -1.72
HDAC8-216ENST00000470998 ARMS2P0C7Q2 107 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 LINC00614P0C842 121 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 BTF3P20290 206 aaKnown RBP4.3□□□□□ -1.72
HDAC8-216ENST00000470998 CRIP1P50238 77 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
HDAC8-216ENST00000470998 APRG1Q8IVJ8 170 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 Q8N2B8 174 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF664Q8N3J9 261 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 DEFB125Q8N687 156 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 OR4X2Q8NGF9 303 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 MYOZ3Q8TDC0 251 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 SGK494Q96LW2 274 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 U3KQK5 164 aa4.3□□□□□ -1.72
HDAC8-216ENST00000470998 TRAV2A0A0B4J234 112 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 TRAV8-2A0A0B4J237 113 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 TRAV21A0A0B4J279 112 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LINC01549A6NIU2 74 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LINC01548A6NM66 108 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF705FA8MVS1 300 aaPredicted RBP4.29□□□□□ -1.72
HDAC8-216ENST00000470998 K7EMI3 77 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 SOCS3O14543 225 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 SNAI2O43623 268 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LEPROTL1O95214 131 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 PPP1R17O96001 155 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LGALS1P09382 135 aaKnown RBP4.29□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF705DP0CH99 300 aaPredicted RBP4.29□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF705BP0CI00 300 aaPredicted RBP4.29□□□□□ -1.72
HDAC8-216ENST00000470998 PROK1P58294 105 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 KRTDAPP60985 99 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LY6EQ16553 131 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LYZL1Q6UWQ5 148 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 PET117Q6UWS5 81 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 FA2HQ7L5A8 372 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 SPATA12Q7Z6I5 190 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 NIT1Q86X76 327 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 ZNF738Q8NE65 137 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 OR10AG1Q8NH19 301 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 LINC01006Q8NI28 216 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 UBE2E2Q96LR5 201 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 RCHY1Q96PM5 261 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 TMEM70Q9BUB7 260 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 NXT2Q9NPJ8 142 aaKnown RBP4.29□□□□□ -1.72
HDAC8-216ENST00000470998 SMPXQ9UHP9 88 aa4.29□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV1-24A0A0C4DH33 117 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 HSBP1L1C9JCN9 74 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 NUPR1O60356 82 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 IGHV4-59P01825 116 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 ORM1P02763 201 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 C3orf79P0CE67 100 aa4.28□□□□□ -1.72
HDAC8-216ENST00000470998 NTF3P20783 257 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms