RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 ABCA4P78363 2273 aa12.04□□□□□ -0.48
ABCF3-206ENST00000466742 TRAV25A0A0B4J276 109 aa12.03□□□□□ -0.48
ABCF3-206ENST00000466742 C19orf84I3L1E1 186 aa12.03□□□□□ -0.48
ABCF3-206ENST00000466742 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
ABCF3-206ENST00000466742 SPTBN1Q01082 2364 aaKnown RBP12.03□□□□□ -0.48
ABCF3-206ENST00000466742 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
ABCF3-206ENST00000466742 SUB1P53999 127 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■■■■■ 35.4
ABCF3-206ENST00000466742 LYPD2Q6UXB3 125 aa12.03□□□□□ -0.48
ABCF3-206ENST00000466742 ODF3Q96PU9 254 aa12.03□□□□□ -0.48
ABCF3-206ENST00000466742 CTSZQ9UBR2 303 aa12.03□□□□□ -0.48
ABCF3-206ENST00000466742 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 CD7P09564 240 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 UTF1Q5T230 341 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 SFTA2Q6UW10 78 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 A0A1W2PPR1 153 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 EXOC3-AS1Q8N2X6 119 aa12.02□□□□□ -0.49
ABCF3-206ENST00000466742 SLC25A20O43772 301 aa12.01□□□□□ -0.49
ABCF3-206ENST00000466742 SAA1P0DJI8 122 aaPredicted RBP12.01□□□□□ -0.49
ABCF3-206ENST00000466742 TMEM14CQ9P0S9 112 aa12.01□□□□□ -0.49
ABCF3-206ENST00000466742 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
ABCF3-206ENST00000466742 LYNX1G3V0Z9 82 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 LYNX1P0DP58 116 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 MRPL23Q16540 153 aaKnown RBP12□□□□□ -0.49
ABCF3-206ENST00000466742 TMEM200BQ69YZ2 307 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 NDUFA11Q86Y39 141 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 LEAP2Q969E1 77 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 RNF185Q96GF1 192 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 BBC3Q96PG8 261 aaPredicted RBP12□□□□□ -0.49
ABCF3-206ENST00000466742 TNCP24821 2201 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 IGHV3-48P01763 117 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 IGKV1-16P04430 117 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
ABCF3-206ENST00000466742 LINC01600Q96MT4 127 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 CHD6Q8TD26 2715 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 RAI1Q7Z5J4 1906 aaPredicted RBP11.99□□□□□ -0.49
ABCF3-206ENST00000466742 NDUFA3O95167 84 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 TNFRSF6BO95407 300 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 LINC00694P0DN24 101 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 Q8N8P6 123 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 C21orf62Q9NYP8 219 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 SIGLEC9Q9Y336 463 aa11.99□□□□□ -0.49
ABCF3-206ENST00000466742 E7EUB6 86 aa11.98□□□□□ -0.49
ABCF3-206ENST00000466742 WT1-ASQ06250 92 aa11.98□□□□□ -0.49
ABCF3-206ENST00000466742 Q8N1Y9 231 aa11.98□□□□□ -0.49
ABCF3-206ENST00000466742 IGLV2-18A0A075B6J9 118 aa11.98□□□□□ -0.49
ABCF3-206ENST00000466742 DUSP14O95147 198 aaKnown RBP11.98□□□□□ -0.49
ABCF3-206ENST00000466742 OR4C13Q8NGP0 309 aa11.98□□□□□ -0.49
ABCF3-206ENST00000466742 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
ABCF3-206ENST00000466742 TRAV12-1A0A0B4J245 112 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 PRB1P04280 392 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 CCL3L1P16619 93 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 ASCL2Q99929 193 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 ZNF843Q8N446 348 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 TIMD4Q96H15 378 aa11.97□□□□□ -0.49
ABCF3-206ENST00000466742 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 CGB1A6NKQ9 187 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 F8VRH5 84 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 H7C1H1 209 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.49
ABCF3-206ENST00000466742 DLX6P56179 175 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 UBTD1Q9HAC8 227 aa11.96□□□□□ -0.49
ABCF3-206ENST00000466742 LY6HO94772 140 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 SRSF9Q13242 221 aaKnown RBP eCLIP11.95□□□□□ -0.5
ABCF3-206ENST00000466742 C8orf49Q96NF6 230 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 HIGD1AQ9Y241 93 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 DSCAML1Q8TD84 2053 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 SH2D1AO60880 128 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 C8orf31Q8N9H6 132 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 BAALCQ8WXS3 180 aa11.95□□□□□ -0.5
ABCF3-206ENST00000466742 C9JAW5 83 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 RUSC1-AS1Q66K80 236 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 LYPD1Q8N2G4 141 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 C10orf126Q8N4M7 172 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 MRPL20Q9BYC9 149 aaKnown RBP11.94□□□□□ -0.5
ABCF3-206ENST00000466742 ONECUT1Q9UBC0 465 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 IGLC6P0CF74 106 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-206ENST00000466742 HRNRQ86YZ3 2850 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-206ENST00000466742 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
ABCF3-206ENST00000466742 TRBV19A0A075B6N1 114 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 M0R2P5 195 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 COX8CQ7Z4L0 72 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 LINC00311Q8N616 119 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 C3orf56Q8N813 242 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 FAM208BQ5VWN6 2430 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 CFC1BP0CG36 223 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 CFC1P0CG37 223 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 TMEM167AQ8TBQ9 72 aa11.93□□□□□ -0.5
ABCF3-206ENST00000466742 A0A1B0GX51 115 aa11.92□□□□□ -0.5
ABCF3-206ENST00000466742 RPL7P18124 248 aaKnown RBP11.92□□□□□ -0.5
ABCF3-206ENST00000466742 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms