RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-204ENST00000439977 IGKCP01834 107 aa10.32□□□□□ -0.76
HERPUD1-204ENST00000439977 SRSF2Q01130 221 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-204ENST00000439977 NRACQ8N912 160 aa10.32□□□□□ -0.76
HERPUD1-204ENST00000439977 IGLV2-18A0A075B6J9 118 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 EDN2P20800 178 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 Q8N8P6 123 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 MOB4Q9Y3A3 225 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 PKD1L2Q7Z442 2459 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 USP9YO00507 2555 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 A6NDN8 102 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 K7ERJ3 54 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 PF4V1P10720 104 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 S100A4P26447 101 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 HSD52Q0P140 79 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 OCIAD2Q56VL3 154 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 C9orf47Q6ZRZ4 202 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 GPHB5Q86YW7 130 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 C14orf178Q8N769 122 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 DPF1Q92782 380 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 ZANQ9Y493 2812 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
HERPUD1-204ENST00000439977 A0A0G2JLM5 398 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 OR9G4Q8NGQ1 327 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 U3KQE9 123 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 POLQO75417 2590 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 SAP30O75446 220 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 FXYD2P54710 66 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 DOPEY2Q9Y3R5 2298 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 H3BUX3 64 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 GNRH2O43555 120 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 LAGE3Q14657 143 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 MYOZ3Q8TDC0 251 aa10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-204ENST00000439977 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
HERPUD1-204ENST00000439977 C9orf118A6NHY6 69 aa10.29□□□□□ -0.76
HERPUD1-204ENST00000439977 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
HERPUD1-204ENST00000439977 MGPP08493 103 aa10.29□□□□□ -0.76
HERPUD1-204ENST00000439977 H3BRM9 83 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 DPM2O94777 84 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 OR4X2Q8NGF9 303 aa10.28□□□□□ -0.76
HERPUD1-204ENST00000439977 TRBV25-1A0A075B6N4 114 aa10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 CDKN1BP46527 198 aa10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 OR10J6PQ8NGY7 276 aa10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 USP9XQ93008 2570 aaPredicted RBP10.27□□□□□ -0.76
HERPUD1-204ENST00000439977 CACNA1AO00555 2505 aa10.27□□□□□ -0.77
HERPUD1-204ENST00000439977 ZMAT4Q9H898 229 aa10.27□□□□□ -0.77
HERPUD1-204ENST00000439977 PHLDA3Q9Y5J5 127 aa10.27□□□□□ -0.77
HERPUD1-204ENST00000439977 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
HERPUD1-204ENST00000439977 SPOCK3Q9BQ16 436 aa10.27□□□□□ -0.77
HERPUD1-204ENST00000439977 SORL1Q92673 2214 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 LINC01546A6NGU7 62 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 FAM223BA6NKX1 122 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.773e-9■■■■■ 32.6
HERPUD1-204ENST00000439977 FAM223AQ8IWN6 122 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 MYO18BQ8IUG5 2567 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
HERPUD1-204ENST00000439977 SIVA1O15304 175 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 C19orf54Q5BKX5 351 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 NRGNQ92686 78 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 MRPL53Q96EL3 112 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 RHPN1-AS1Q9BWJ2 59 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 IGHV4-30-2A0A087WSY4 118 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 ATP5LO75964 103 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 RASL10AQ92737 203 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 JPT2Q9H910 190 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
HERPUD1-204ENST00000439977 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 GTF2H5Q6ZYL4 71 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 SMIM2Q9BVW6 85 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 ASIPP42127 132 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 C10orf99Q6UWK7 81 aa10.24□□□□□ -0.77
HERPUD1-204ENST00000439977 A0A1W2PPM0 123 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 SMIM13P0DJ93 91 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 SUMO2P61956 95 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 K7EP34 96 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 NDUFA4O00483 81 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 AVPP01185 164 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 ATP5J2P56134 94 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 CCL19Q99731 98 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 MEGF9Q9H1U4 602 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 A0A087WX48 190 aa10.23□□□□□ -0.77
HERPUD1-204ENST00000439977 SOCS3O14543 225 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms