RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 SPTAN1Q13813 2472 aaKnown RBP13.86□□□□□ -0.19
KDM1A-202ENST00000400181 MYMXA0A1B0GTQ4 84 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 PLNP26678 52 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 ZNF48Q96MX3 618 aaPredicted RBP13.85□□□□□ -0.19
KDM1A-202ENST00000400181 F8VRH5 84 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 H7C1H1 209 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 NDUFS8O00217 210 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 APOMO95445 188 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 MGPP08493 103 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 RAXQ9Y2V3 346 aa13.85□□□□□ -0.19
KDM1A-202ENST00000400181 TRBV7-3A0A075B6L6 115 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 HOXA3O43365 443 aaPredicted RBP13.84□□□□□ -0.19
KDM1A-202ENST00000400181 Q8NA96 180 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 HLA-DRB4P13762 266 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 SRSF9Q13242 221 aaKnown RBP eCLIP13.84□□□□□ -0.19
KDM1A-202ENST00000400181 ZNF502Q8TBZ5 544 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 CLUHP3Q96NS8 147 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 HLA-DRB4X5D2U9 266 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 C14orf178Q8N769 122 aaPredicted RBP13.84□□□□□ -0.19
KDM1A-202ENST00000400181 LY6G5BQ8NDX9 201 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 KLHL30-AS1Q8NEE0 82 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 ATP6V0BQ99437 205 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 SMIM2Q9BVW6 85 aa13.84□□□□□ -0.19
KDM1A-202ENST00000400181 LINC01549A6NIU2 74 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 LINC01548A6NM66 108 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 PSMB2P49721 201 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 PRR9Q5T870 116 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 PTH2Q96A98 100 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 IGKV3-7A0A075B6H7 116 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 A0A1B0GV72 72 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 S100A4P26447 101 aaKnown RBP13.83□□□□□ -0.2
KDM1A-202ENST00000400181 RAB9AP51151 201 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 SRSF2Q01130 221 aaKnown RBP13.83□□□□□ -0.2
KDM1A-202ENST00000400181 C8orf86Q6ZUL3 223 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 PRADC1Q9BSG0 188 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 ZFAND3Q9H8U3 227 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 MSRB2Q9Y3D2 182 aa13.83□□□□□ -0.2
KDM1A-202ENST00000400181 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 ZNF815PA8K554 130 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 MORN3Q6PF18 240 aaPredicted RBP13.82□□□□□ -0.2
KDM1A-202ENST00000400181 ATP6V0E1O15342 81 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
KDM1A-202ENST00000400181 PRTN3P24158 256 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 TAL2Q16559 108 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 PRO0461Q9UI25 63 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 CKS1BP61024 79 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 PLEKHB2Q96CS7 222 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 TIMD4Q96H15 378 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 C16orf92Q96LL3 132 aa13.82□□□□□ -0.2
KDM1A-202ENST00000400181 ZFP2Q6ZN57 461 aa13.81□□□□□ -0.2
KDM1A-202ENST00000400181 SPOCK3Q9BQ16 436 aa13.81□□□□□ -0.2
KDM1A-202ENST00000400181 SLC25A16P16260 332 aa13.81□□□□□ -0.2
KDM1A-202ENST00000400181 SYT8Q8NBV8 401 aa13.81□□□□□ -0.2
KDM1A-202ENST00000400181 SLC50A1Q9BRV3 221 aa13.81□□□□□ -0.2
KDM1A-202ENST00000400181 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
KDM1A-202ENST00000400181 ODF3BA8MYP8 253 aa13.8□□□□□ -0.2
KDM1A-202ENST00000400181 GLMPQ8WWB7 406 aa13.8□□□□□ -0.2
KDM1A-202ENST00000400181 SPATA25Q9BR10 227 aa13.8□□□□□ -0.2
KDM1A-202ENST00000400181 Q8N9W7 124 aa13.8□□□□□ -0.2
KDM1A-202ENST00000400181 SUMO2P61956 95 aaKnown RBP13.79□□□□□ -0.2
KDM1A-202ENST00000400181 C2orf66Q6UXQ4 117 aa13.79□□□□□ -0.2
KDM1A-202ENST00000400181 CCDC140Q96MF4 163 aa13.79□□□□□ -0.2
KDM1A-202ENST00000400181 PTPRQQ9UMZ3 2332 aa13.79□□□□□ -0.2
KDM1A-202ENST00000400181 METTL26Q96S19 204 aa13.79□□□□□ -0.2
KDM1A-202ENST00000400181 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
KDM1A-202ENST00000400181 PRSS29PA6NIE9 313 aa13.78□□□□□ -0.2
KDM1A-202ENST00000400181 SCGB1A1P11684 91 aa13.78□□□□□ -0.2
KDM1A-202ENST00000400181 RASL10AQ92737 203 aa13.78□□□□□ -0.2
KDM1A-202ENST00000400181 RPL11P62913 178 aaKnown RBP13.77□□□□□ -0.2
KDM1A-202ENST00000400181 PHLDA3Q9Y5J5 127 aa13.77□□□□□ -0.2
KDM1A-202ENST00000400181 MAP1AP78559 2803 aaPredicted RBP13.77□□□□□ -0.2
KDM1A-202ENST00000400181 CELSR1Q9NYQ6 3014 aa13.77□□□□□ -0.2
KDM1A-202ENST00000400181 RBAKDNA6NC62 111 aa13.77□□□□□ -0.21
KDM1A-202ENST00000400181 BAALCQ8WXS3 180 aa13.77□□□□□ -0.21
KDM1A-202ENST00000400181 SMCPP49901 116 aaPredicted RBP13.77□□□□□ -0.21
KDM1A-202ENST00000400181 ARL3P36405 182 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 FOXI1Q12951 378 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 ORMDL2Q53FV1 153 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 NFE4Q86UQ8 179 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 NEXN-AS1Q8NBZ9 246 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 ZFHX3Q15911 3703 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 ZFP36P26651 326 aaKnown RBP13.76□□□□□ -0.21
KDM1A-202ENST00000400181 Q8N6K4 173 aa13.76□□□□□ -0.21
KDM1A-202ENST00000400181 M0R1W7 72 aa13.75□□□□□ -0.21
KDM1A-202ENST00000400181 DLX4Q92988 240 aaPredicted RBP13.75□□□□□ -0.21
KDM1A-202ENST00000400181 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
KDM1A-202ENST00000400181 F6UB75 175 aa13.75□□□□□ -0.21
KDM1A-202ENST00000400181 TOMM6Q96B49 74 aa13.75□□□□□ -0.21
KDM1A-202ENST00000400181 DUSP14O95147 198 aaKnown RBP13.75□□□□□ -0.21
KDM1A-202ENST00000400181 FAM110DQ8TAY7 271 aaPredicted RBP13.75□□□□□ -0.21
KDM1A-202ENST00000400181 MRAP2Q96G30 205 aa13.75□□□□□ -0.21
KDM1A-202ENST00000400181 TRAV12-1A0A0B4J245 112 aa13.74□□□□□ -0.21
KDM1A-202ENST00000400181 GNRH2O43555 120 aa13.74□□□□□ -0.21
KDM1A-202ENST00000400181 TRAV26-1A0A087WT03 109 aa13.74□□□□□ -0.21
KDM1A-202ENST00000400181 TSPAN13O95857 204 aa13.74□□□□□ -0.21
KDM1A-202ENST00000400181 SPINK8P0C7L1 97 aa13.74□□□□□ -0.21
KDM1A-202ENST00000400181 RNASE4P34096 147 aaKnown RBP13.74□□□□□ -0.21
KDM1A-202ENST00000400181 MT-ATP8P03928 68 aa13.73□□□□□ -0.21
KDM1A-202ENST00000400181 TMEM219Q86XT9 240 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms