RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RNF223E7ERA6 249 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 SMIM17P0DL12 118 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 PRSS47A8MTI9 375 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 EDN2P20800 178 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 NEGR1Q7Z3B1 354 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 ST20Q9HBF5 79 aa8.02□□□□□ -1.13
CPSF1P1-201ENST00000397477 CCL25O15444 150 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 PAX2Q02962 417 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 GTSCR1Q86UQ5 136 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 MYOZ3Q8TDC0 251 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 IGKV3D-20A0A0C4DH25 116 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 COX6B1P14854 86 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 C10orf105Q8TEF2 133 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 BEX4Q9NWD9 120 aaPredicted RBP8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 C11orf21Q9P2W6 132 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 GNRH2O43555 120 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 AVPP01185 164 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 GCSHP23434 173 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 RBX1P62877 108 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 PSMG4Q5JS54 123 aa8.01□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 CLPSL1A2RUU4 121 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 IGHG4P01861 327 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 RIPPLY3P57055 190 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 JMJD1CQ15652 2540 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRAV12-2A0A075B6T6 113 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 B4DSR2 109 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 DEFB112Q30KQ8 113 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 C20orf173Q96LM9 149 aa8□□□□□ -1.13
CPSF1P1-201ENST00000397477 A0A087WWL8 130 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 ASIPP42127 132 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 SYNJ2BPP57105 145 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 C12orf54Q6X4T0 127 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 K7EMI3 77 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 CD7P09564 240 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 ANXA2RQ3ZCQ2 193 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 FAM159AQ6UWV7 190 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 OR2K2Q8NGT1 345 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 AJUBAQ96IF1 538 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRAV8-2A0A0B4J237 113 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 A0A0G2JLM5 398 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 EMP1P54849 157 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 ZNF48Q96MX3 618 aaPredicted RBP7.99□□□□□ -1.13
CPSF1P1-201ENST00000397477 MRPS16Q9Y3D3 137 aaKnown RBP7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 PRR9Q5T870 116 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 AMMECR1LQ6DCA0 310 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 C9orf139Q6ZV77 190 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 HIVEP2P31629 2446 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRAV21A0A0B4J279 112 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 DEFB136Q30KP8 78 aa7.98□□□□□ -1.13
CPSF1P1-201ENST00000397477 LINC00477Q96M19 166 aa7.97□□□□□ -1.13
CPSF1P1-201ENST00000397477 ZNF256Q9Y2P7 627 aaPredicted RBP7.97□□□□□ -1.13
CPSF1P1-201ENST00000397477 CUBNO60494 3623 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 TRBV6-1A0A0K0K1D8 114 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 ID1P41134 155 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 CDKN1BP46527 198 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 ZC2HC1BQ5TFG8 222 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 PIFOQ8TCI5 191 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 RPL39LQ96EH5 51 aaKnown RBP7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 DAZ1Q9NQZ3 744 aaKnown RBP7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 PEF1Q9UBV8 284 aaKnown RBP7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 A0A1W2PRX2 142 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 UBE2V1Q13404 147 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 COX11Q9Y6N1 276 aa7.96□□□□□ -1.13
CPSF1P1-201ENST00000397477 AGRNO00468 2067 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGHV3-73A0A0B4J1V6 119 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 PPBPP02775 128 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGLC6P0CF74 106 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 LINC01545Q5VT33 79 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 C16orf54Q6UWD8 224 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 SCGB3A1Q96QR1 104 aa7.96□□□□□ -1.14
CPSF1P1-201ENST00000397477 TMEM97Q5BJF2 176 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 DPF1Q92782 380 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 JPT2Q9H910 190 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 IGHV3OR16-12A0A075B7B8 117 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 H3BUT2 72 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 NDUFA4O00483 81 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 ZNF56Q15929 161 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 ZNF493Q6ZR52 646 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 USMG5Q96IX5 58 aa7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 FN1P02751 2386 aaKnown RBP7.95□□□□□ -1.14
CPSF1P1-201ENST00000397477 TMEM8BA6NDV4 472 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 K7ERU9 68 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 OVOL1O14753 267 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 LAGE3Q14657 143 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 RNF185Q96GF1 192 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 SCRT2Q9NQ03 307 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 CIDEAO60543 219 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 MS4A6AQ9H2W1 248 aa7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 MRPL35Q9NZE8 188 aaKnown RBP7.94□□□□□ -1.14
CPSF1P1-201ENST00000397477 USP24Q9UPU5 2620 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms