RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IGHV3-16A0A0C4DH30 117 aa11.47□□□□□ -0.57
PDLIM7-201ENST00000355572 IFNA7P01567 189 aa11.47□□□□□ -0.57
PDLIM7-201ENST00000355572 TYMSP04818 313 aa11.47□□□□□ -0.57
PDLIM7-201ENST00000355572 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
PDLIM7-201ENST00000355572 CMTM2Q8TAZ6 248 aa11.47□□□□□ -0.57
PDLIM7-201ENST00000355572 PAX4O43316 350 aa11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 TDRG1Q3Y452 100 aa11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 SOHLH1Q5JUK2 328 aa11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 TEX261Q6UWH6 196 aa11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 INO80EQ8NBZ0 244 aaPredicted RBP11.46□□□□□ -0.57
PDLIM7-201ENST00000355572 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 BCL2L11O43521 198 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 TCRAP04437 139 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 FAM159AQ6UWV7 190 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 RASL10AQ92737 203 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 KRTAP4-5Q9BYR2 181 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 TREM1Q9NP99 234 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 TNFRSF18Q9Y5U5 241 aa11.45□□□□□ -0.58
PDLIM7-201ENST00000355572 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 MED14OSP0DP75 135 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 CYTL1Q9NRR1 136 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 HHLA3Q9XRX5 114 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
PDLIM7-201ENST00000355572 PCLOQ9Y6V0 5065 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 TRGV11A0A075B6L2 103 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 SUMO1P63165 101 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 FAM74A1Q5RGS3 127 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 LYPD5Q6UWN5 251 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 DPPA3Q6W0C5 159 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 Q6ZRN7 208 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 ICOSQ9Y6W8 199 aa11.43□□□□□ -0.58
PDLIM7-201ENST00000355572 TRAV21A0A0B4J279 112 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 NXPH4O95158 308 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 SERF2P84101 59 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 STOML3Q8TAV4 291 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 DNAH5Q8TE73 4624 aa11.42□□□□□ -0.58
PDLIM7-201ENST00000355572 TRAV34A0A0B4J273 112 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 K7EQD1 137 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 TAAR5O14804 337 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 FGF8P55075 233 aaPredicted RBP11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 LINC00315P59091 139 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 SPXQ9BT56 116 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
PDLIM7-201ENST00000355572 HSPG2P98160 4391 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 TRGV4A0A0C4DH28 118 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 CXorf1O96002 111 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 GCGP01275 180 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 GYPEP15421 78 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 EIF5AP63241 154 aaKnown RBP11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 FLI1Q01543 452 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 PRNTQ86SH4 94 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
PDLIM7-201ENST00000355572 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 M0R2P5 195 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 SIVA1O15304 175 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 ATP6V1G1O75348 118 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 UBE2G2P60604 165 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
PDLIM7-201ENST00000355572 A0A1W2PPQ1 181 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 MBP02144 154 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 MRPL23Q16540 153 aaKnown RBP11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 TTC32Q5I0X7 151 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 SPATA12Q7Z6I5 190 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 C9orf85Q96MD7 179 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
PDLIM7-201ENST00000355572 IGKV3D-20A0A0C4DH25 116 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 CTXND1A0A1B0GTU2 59 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 FHITP49789 147 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 RAB14P61106 215 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 CYB561D1Q8N8Q1 229 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 OR4C5Q8NGB2 326 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 TMEM167BQ9NRX6 74 aa11.37□□□□□ -0.59
PDLIM7-201ENST00000355572 APOBP04114 4563 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 ABCA13Q86UQ4 5058 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 BORCS7-ASMTA0A0B4J1R7 106 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 C9JCJ5 164 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 TPT1P13693 172 aaKnown RBP11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 GATA1P15976 413 aaPredicted RBP11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 SLAQ13239 276 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 ARL2-SNX15V9GYD0 113 aa11.36□□□□□ -0.59
PDLIM7-201ENST00000355572 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
PDLIM7-201ENST00000355572 LINC00862A6NCI5 91 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms