RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
SVIP-201ENST00000354193 TRAV8-2A0A0B4J237 113 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 CDPF1Q6NVV7 123 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 FAM231DQ6ZW35 169 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 LINC01587Q99440 93 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 NSD1Q96L73 2696 aaPredicted RBP8.41□□□□□ -1.06
SVIP-201ENST00000354193 PYY3Q5JQD4 70 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 OR9G4Q8NGQ1 327 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 A0A087WWL8 130 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 TCF21O43680 179 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 PRM2P04554 102 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 CD300EQ496F6 205 aaPredicted RBP8.41□□□□□ -1.06
SVIP-201ENST00000354193 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
SVIP-201ENST00000354193 GPHB5Q86YW7 130 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 BTF3P20290 206 aaKnown RBP8.41□□□□□ -1.06
SVIP-201ENST00000354193 YPEL4Q96NS1 127 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 ZNF492Q9P255 531 aa8.41□□□□□ -1.06
SVIP-201ENST00000354193 STHQ8IWL8 128 aa8.4□□□□□ -1.06
SVIP-201ENST00000354193 TYMSP04818 313 aa8.4□□□□□ -1.06
SVIP-201ENST00000354193 RIPPLY3P57055 190 aa8.4□□□□□ -1.06
SVIP-201ENST00000354193 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
SVIP-201ENST00000354193 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.07
SVIP-201ENST00000354193 NIT1Q86X76 327 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 RAX2Q96IS3 184 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 ZNF56Q15929 161 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 A8MWP6 167 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
SVIP-201ENST00000354193 TSPOP30536 169 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 KCNS1Q96KK3 526 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 LEPROTL1O95214 131 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 ORMDL3Q8N138 153 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 SMIM6P0DI80 62 aa8.38□□□□□ -1.07
SVIP-201ENST00000354193 PRSS1P07477 247 aa8.37□□□□□ -1.07
SVIP-201ENST00000354193 PRR9Q5T870 116 aa8.37□□□□□ -1.07
SVIP-201ENST00000354193 REC114Q7Z4M0 266 aa8.37□□□□□ -1.07
SVIP-201ENST00000354193 TSSC4Q9Y5U2 329 aaPredicted RBP8.37□□□□□ -1.07
SVIP-201ENST00000354193 OR11H12B2RN74 326 aa8.37□□□□□ -1.07
SVIP-201ENST00000354193 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
SVIP-201ENST00000354193 VAMP8Q9BV40 100 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 ZNF256Q9Y2P7 627 aaPredicted RBP8.36□□□□□ -1.07
SVIP-201ENST00000354193 LOC102724200A0A096LPH7 203 aaPredicted RBP8.36□□□□□ -1.07
SVIP-201ENST00000354193 IGKV3D-20A0A0C4DH25 116 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 IGHV3-53P01767 116 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 Q6AWC8 147 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 IFITM10A6NMD0 228 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 ZNF324O75467 553 aaPredicted RBP8.36□□□□□ -1.07
SVIP-201ENST00000354193 LINC00614P0C842 121 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 ATP5L2Q7Z4Y8 100 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 SMIM12Q96EX1 92 aa8.36□□□□□ -1.07
SVIP-201ENST00000354193 FBLL1A6NHQ2 334 aaKnown RBP8.35□□□□□ -1.07
SVIP-201ENST00000354193 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 JPT2Q9H910 190 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
SVIP-201ENST00000354193 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 K7EMT4 169 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 CDKN1BP46527 198 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
SVIP-201ENST00000354193 CRIP2P52943 208 aaPredicted RBP8.35□□□□□ -1.07
SVIP-201ENST00000354193 TP53TG3Q9ULZ0 132 aa8.35□□□□□ -1.07
SVIP-201ENST00000354193 C20orf202A1L168 122 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 MRPL51Q4U2R6 128 aaKnown RBP8.34□□□□□ -1.07
SVIP-201ENST00000354193 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 CT83Q5H943 113 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 A0A087X0K7 114 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 C4orf3Q8WVX3 66 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 U3KQE9 123 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 FSHBP01225 129 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 CFHR3Q02985 330 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 ZNF876PQ49A33 203 aa8.34□□□□□ -1.07
SVIP-201ENST00000354193 IGHV3-16A0A0C4DH30 117 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 TCAPO15273 167 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 HILS1P60008 231 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 DEFA6Q01524 100 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 C7orf71A4D174 169 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 NPYP01303 97 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 FAM104BQ5XKR9 115 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 NUTF2P61970 127 aaKnown RBP8.33□□□□□ -1.08
SVIP-201ENST00000354193 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
SVIP-201ENST00000354193 SNAI2O43623 268 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 TMEM86BQ8N661 226 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 K7EQG2 157 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 NUDT3O95989 172 aa8.32□□□□□ -1.08
SVIP-201ENST00000354193 LEPP41159 167 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms