RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 CHAC1Q9BUX1 264 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 TRAV41A0A0B4J266 112 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 Q6ZQT7 251 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 GTSCR1Q86UQ5 136 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 BPESC1Q9GZL8 116 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 MOB4Q9Y3A3 225 aa13.66□□□□□ -0.22
TRIM50-201ENST00000333149 CHD6Q8TD26 2715 aa13.65□□□□□ -0.22
TRIM50-201ENST00000333149 PRR9Q5T870 116 aa13.65□□□□□ -0.22
TRIM50-201ENST00000333149 RAB37Q96AX2 223 aa13.65□□□□□ -0.22
TRIM50-201ENST00000333149 MRPL35Q9NZE8 188 aaKnown RBP13.65□□□□□ -0.22
TRIM50-201ENST00000333149 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
TRIM50-201ENST00000333149 TRAV26-2A0A0B4J265 109 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 TRAV40A0A0B4J280 105 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 BRI3O95415 125 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 FXYD2P54710 66 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 NEGR1Q7Z3B1 354 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 UFC1Q9Y3C8 167 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 CSMD1Q96PZ7 3565 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 PHLDA1Q8WV24 401 aaPredicted RBP13.64□□□□□ -0.23
TRIM50-201ENST00000333149 UBTD1Q9HAC8 227 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 SPCS1Q9Y6A9 102 aa13.64□□□□□ -0.23
TRIM50-201ENST00000333149 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 K7EMI3 77 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 GCSHP23434 173 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 TAL2Q16559 108 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 ZFAND2AQ8N6M9 145 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 NAA38Q9BRA0 125 aaKnown RBP13.63□□□□□ -0.23
TRIM50-201ENST00000333149 SMIM2Q9BVW6 85 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 TMEM160Q9NX00 188 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 H3BVH4 76 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 SOCS3O14543 225 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 OVOL1O14753 267 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 FABP2P12104 132 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 PLNP26678 52 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 SAMD5Q5TGI4 173 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 CEND1Q8N111 149 aa13.63□□□□□ -0.23
TRIM50-201ENST00000333149 KMT2BQ9UMN6 2715 aaPredicted RBP13.62□□□□□ -0.23
TRIM50-201ENST00000333149 C19orf84I3L1E1 186 aa13.62□□□□□ -0.23
TRIM50-201ENST00000333149 NDUFA4O00483 81 aa13.62□□□□□ -0.23
TRIM50-201ENST00000333149 MED14OSP0DP75 135 aa13.62□□□□□ -0.23
TRIM50-201ENST00000333149 ARL3P36405 182 aa13.62□□□□□ -0.23
TRIM50-201ENST00000333149 C20orf78Q9BR46 151 aa13.62□□□□□ -0.23
TRIM50-201ENST00000333149 TRAV21A0A0B4J279 112 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 SLC25A16P16260 332 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 COTL1Q14019 142 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 FAM19A4Q96LR4 140 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 MYO18BQ8IUG5 2567 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 G3V4G9 280 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.61□□□□□ -0.23
TRIM50-201ENST00000333149 SAP30O75446 220 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 IGF1P05019 195 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
TRIM50-201ENST00000333149 TM4SF20Q53R12 229 aa13.6□□□□□ -0.23
TRIM50-201ENST00000333149 TMEM219Q86XT9 240 aa13.6□□□□□ -0.23
TRIM50-201ENST00000333149 MAPKAPK5-AS1Q8N8E1 139 aa13.6□□□□□ -0.23
TRIM50-201ENST00000333149 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
TRIM50-201ENST00000333149 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 F8VRH5 84 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 H7C1H1 209 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 OR10J6PQ8NGY7 276 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 TOMM6Q96B49 74 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 LINC01619G3V211 115 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 H3BUA1 57 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 M0R381 172 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
TRIM50-201ENST00000333149 UNQ9165/PRO28630Q6UXU0 137 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 RASL10AQ92737 203 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 DPH3P1Q9H4G8 78 aa13.59□□□□□ -0.23
TRIM50-201ENST00000333149 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
TRIM50-201ENST00000333149 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
TRIM50-201ENST00000333149 IGHV1-69P01742 117 aa13.58□□□□□ -0.24
TRIM50-201ENST00000333149 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
TRIM50-201ENST00000333149 CSTL1Q9H114 145 aa13.58□□□□□ -0.24
TRIM50-201ENST00000333149 SPTAN1Q13813 2472 aaKnown RBP13.57□□□□□ -0.24
TRIM50-201ENST00000333149 ASIPP42127 132 aa13.57□□□□□ -0.24
TRIM50-201ENST00000333149 POM121L12Q8N7R1 296 aa13.57□□□□□ -0.24
TRIM50-201ENST00000333149 LINC00527Q9UJ94 153 aa13.57□□□□□ -0.24
TRIM50-201ENST00000333149 USP9XQ93008 2570 aaPredicted RBP13.57□□□□□ -0.24
TRIM50-201ENST00000333149 E9PLD3 99 aa13.56□□□□□ -0.24
TRIM50-201ENST00000333149 TRBV12-3P01733 135 aa13.56□□□□□ -0.24
TRIM50-201ENST00000333149 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
TRIM50-201ENST00000333149 DOPEY1Q5JWR5 2465 aa13.56□□□□□ -0.24
TRIM50-201ENST00000333149 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
TRIM50-201ENST00000333149 IGHG2P01859 326 aa13.55□□□□□ -0.24
TRIM50-201ENST00000333149 ANXA2RQ3ZCQ2 193 aa13.55□□□□□ -0.24
TRIM50-201ENST00000333149 SCGB3A1Q96QR1 104 aa13.55□□□□□ -0.24
TRIM50-201ENST00000333149 NHP2Q9NX24 153 aaKnown RBP13.55□□□□□ -0.24
TRIM50-201ENST00000333149 PPP1R17O96001 155 aa13.54□□□□□ -0.24
TRIM50-201ENST00000333149 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
TRIM50-201ENST00000333149 CHTOPQ9Y3Y2 248 aaKnown RBP13.54□□□□□ -0.24
TRIM50-201ENST00000333149 PHLDA3Q9Y5J5 127 aa13.54□□□□□ -0.24
TRIM50-201ENST00000333149 K7ERJ3 54 aa13.54□□□□□ -0.24
TRIM50-201ENST00000333149 NXPH4O95158 308 aa13.54□□□□□ -0.24
TRIM50-201ENST00000333149 FAM208BQ5VWN6 2430 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms