RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CCL17Q92583 94 aa18.8■□□□□ 0.6
SOX1-201ENST00000330949 ABCA4P78363 2273 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 CNIH1O95406 144 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 TMEM155Q4W5P6 130 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 SCGB3A1Q96QR1 104 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 SNCGO76070 127 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 NEXN-AS1Q8NBZ9 246 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 DCHS2Q6V1P9 2916 aa18.79■□□□□ 0.6
SOX1-201ENST00000330949 IGHV1-3A0A0C4DH29 117 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 VKORC1Q9BQB6 163 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 TRAV26-2A0A0B4J265 109 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 SLC25A16P16260 332 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 LOXP28300 417 aaPredicted RBP18.78■□□□□ 0.6
SOX1-201ENST00000330949 HERV-K104P63124 156 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 ORMDL2Q53FV1 153 aa18.78■□□□□ 0.6
SOX1-201ENST00000330949 ASCL5Q7RTU5 278 aa18.77■□□□□ 0.6
SOX1-201ENST00000330949 ASH1LQ9NR48 2969 aaKnown RBP18.77■□□□□ 0.6
SOX1-201ENST00000330949 SCGB1C2P0DMR2 95 aa18.77■□□□□ 0.59
SOX1-201ENST00000330949 GFRALQ6UXV0 394 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 PLEKHB2Q96CS7 222 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 SMIM2Q9BVW6 85 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 LYPD2Q6UXB3 125 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 TOMM6Q96B49 74 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 CTSZQ9UBR2 303 aa18.76■□□□□ 0.59
SOX1-201ENST00000330949 M0QXV9 152 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 COX6B1P14854 86 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 RPL32P62910 135 aaKnown RBP18.75■□□□□ 0.59
SOX1-201ENST00000330949 TTC32Q5I0X7 151 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 AJUBAQ96IF1 538 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 IGHG4P01861 327 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 CFHR4Q92496 578 aa18.75■□□□□ 0.59
SOX1-201ENST00000330949 TLN1Q9Y490 2541 aaKnown RBP18.74■□□□□ 0.59
SOX1-201ENST00000330949 SPANXA1Q9NS26 97 aa18.74■□□□□ 0.59
SOX1-201ENST00000330949 IFITM1P13164 125 aa18.74■□□□□ 0.59
SOX1-201ENST00000330949 RAX2Q96IS3 184 aa18.74■□□□□ 0.59
SOX1-201ENST00000330949 TMEM178BH3BS89 294 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 MFAP4P55083 255 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 IGFL4Q6B9Z1 124 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 C10orf126Q8N4M7 172 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 RNF5Q99942 180 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 KLK15Q9H2R5 256 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 TRAV8-2A0A0B4J237 113 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 SMIM20Q8N5G0 67 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 PRSS33Q8NF86 280 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 S4R3C0 116 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 IGKV3D-20A0A0C4DH25 116 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 C17orf100A8MU93 164 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 SLC25A20O43772 301 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 HLA-DMBP28068 263 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 Q6Q795 121 aa18.73■□□□□ 0.59
SOX1-201ENST00000330949 IGLV1-47P01700 117 aa18.72■□□□□ 0.59
SOX1-201ENST00000330949 DYNAPQ8N1N2 210 aa18.72■□□□□ 0.59
SOX1-201ENST00000330949 ERCC8Q13216 396 aa18.72■□□□□ 0.59
SOX1-201ENST00000330949 CCDC179H3BU77 68 aa18.71■□□□□ 0.59
SOX1-201ENST00000330949 MUC6Q6W4X9 2439 aa18.71■□□□□ 0.59
SOX1-201ENST00000330949 MED13LQ71F56 2210 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 BUB1B-PAK6H3BSN5 160 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 PRTN3P24158 256 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 BAALCQ8WXS3 180 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 TGFAP01135 160 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 ANXA2RQ3ZCQ2 193 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 RASL10AQ92737 203 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 SLC50A1Q9BRV3 221 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 SMAD5-AS1Q9Y6J3 95 aa18.7■□□□□ 0.58
SOX1-201ENST00000330949 TRAV4A0A0B4J268 109 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 CFC1BP0CG36 223 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 CFC1P0CG37 223 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 A0A0J9YY99 117 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 SPANXN1Q5VSR9 72 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 NUP37Q8NFH4 326 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 IGHV4-4A0A075B6R2 117 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 CENPVL3A0A0U1RRI6 287 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 BSPH1Q075Z2 132 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 ONECUT1Q9UBC0 465 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 PRO1854Q9UHT4 67 aa18.69■□□□□ 0.58
SOX1-201ENST00000330949 RBAKDNA6NC62 111 aa18.68■□□□□ 0.58
SOX1-201ENST00000330949 IGHV7-4-1A0A0J9YVY3 117 aa18.68■□□□□ 0.58
SOX1-201ENST00000330949 ADIPOQQ15848 244 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 KLHL30-AS1Q8NEE0 82 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 C9JAW5 83 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 HERVK_113P61574 105 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 C11orf21Q9P2W6 132 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 KAAG1Q9UBP8 84 aa18.67■□□□□ 0.58
SOX1-201ENST00000330949 SUMO2P61956 95 aaKnown RBP18.66■□□□□ 0.58
SOX1-201ENST00000330949 C2orf66Q6UXQ4 117 aa18.66■□□□□ 0.58
SOX1-201ENST00000330949 IGHV3-30P01768 117 aa18.65■□□□□ 0.58
SOX1-201ENST00000330949 IGHV3-30-5P0DP03 117 aa18.65■□□□□ 0.58
SOX1-201ENST00000330949 C21orf62Q9NYP8 219 aa18.65■□□□□ 0.58
SOX1-201ENST00000330949 SCGB2A1O75556 95 aa18.64■□□□□ 0.58
SOX1-201ENST00000330949 A0A0G2JNJ9 132 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 PRAC2D3DTV9 90 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 F8W735 103 aaPredicted RBP18.64■□□□□ 0.57
SOX1-201ENST00000330949 CRLF1O75462 422 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 Q9UFV3 132 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 IGLV11-55A0A075B6I3 123 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 PAPPA-AS1Q5QFB9 102 aa18.64■□□□□ 0.57
SOX1-201ENST00000330949 LYNX1G3V0Z9 82 aa18.63■□□□□ 0.57
SOX1-201ENST00000330949 LYNX1P0DP58 116 aa18.63■□□□□ 0.57
SOX1-201ENST00000330949 IGFBPL1Q8WX77 278 aa18.63■□□□□ 0.57
SOX1-201ENST00000330949 FANCD2OSQ96PS1 177 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms