RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 USF3Q68DE3 2245 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 NBASA2RRP1 2371 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 G3V318 75 aa13□□□□□ -0.33
SNAPC4-201ENST00000298532 SRSF2Q01130 221 aaKnown RBP13□□□□□ -0.33
SNAPC4-201ENST00000298532 NDUFA4O00483 81 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 PCNX2A6NKB5 2137 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 CHD3Q12873 2000 aaKnown RBP12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 KLK9Q9UKQ9 250 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 MSMBP08118 114 aa12.99□□□□□ -0.33
SNAPC4-201ENST00000298532 INS-IGF2F8WCM5 200 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 C8orf31Q8N9H6 132 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 HIGD1BQ9P298 99 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 SS18L2Q9UHA2 77 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf53Q8IXP5 236 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
SNAPC4-201ENST00000298532 GP9P14770 177 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 RNF114Q9Y508 228 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 DYNAPQ8N1N2 210 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
SNAPC4-201ENST00000298532 IGHV1-69DA0A0B4J2H0 117 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 RBAKDNA6NC62 111 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 FXYD2P54710 66 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 C11orf1Q9H5F2 150 aa12.96□□□□□ -0.33
SNAPC4-201ENST00000298532 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 PFN2P35080 140 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 WFDC2Q14508 124 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 TEN1Q86WV5 123 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 RNF138Q8WVD3 245 aa12.96□□□□□ -0.34
SNAPC4-201ENST00000298532 RHOHQ15669 191 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 KAAG1Q9UBP8 84 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 CRYBA4P53673 196 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 CFHR4Q92496 578 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 RNF223E7ERA6 249 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 ACYP1P07311 99 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
SNAPC4-201ENST00000298532 HERVK_113P63121 156 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 Q96MF0 132 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV3-16A0A0C4DH30 117 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 GTSF1Q8WW33 167 aa12.94□□□□□ -0.34
SNAPC4-201ENST00000298532 G3V4G9 280 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 HAMPP81172 84 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 ZFHX2Q9C0A1 2572 aaPredicted RBP12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 SPRY4Q9C004 299 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 C3orf56Q8N813 242 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 ZNRF2Q8NHG8 242 aa12.93□□□□□ -0.34
SNAPC4-201ENST00000298532 F8WEM9 126 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
SNAPC4-201ENST00000298532 FOXE3Q13461 319 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV3-38A0A0C4DH36 116 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■■■ 28.4
SNAPC4-201ENST00000298532 EML6Q6ZMW3 1958 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
SNAPC4-201ENST00000298532 NSUN5P1Q3KNT7 163 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 SMIM20Q8N5G0 67 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 RPL32P62910 135 aaKnown RBP12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 IGHV1-69P01742 117 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 FOXI1Q12951 378 aa12.9□□□□□ -0.34
SNAPC4-201ENST00000298532 ABCA4P78363 2273 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 CR1LQ2VPA4 569 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PCNX1Q96RV3 2341 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 BAALC-AS2P0C853 105 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB130BP0DP73 79 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB130AP0DP74 79 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 IGHV7-4-1A0A0J9YVY3 117 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PRSS47A8MTI9 375 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 CRLF1O75462 422 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 TTTY13Q9BZ97 58 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 PRORYQ9H606 182 aa12.89□□□□□ -0.35
SNAPC4-201ENST00000298532 C2orf70A6NJV1 201 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 KMT2EQ8IZD2 1858 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 GNRH2O43555 120 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 TRAV12-1A0A0B4J245 112 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 I3L2K1 104 aa12.88□□□□□ -0.35
SNAPC4-201ENST00000298532 A4D1N5 150 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 RBMY1FQ15415 496 aaKnown RBP12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 TINCRA0A1B0GVN0 87 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 IGLV2-14P01704 120 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 LINC01620Q4KN68 170 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms