RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HSD52Q0P140 79 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 VAMP3Q15836 100 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 Q6ZQT7 251 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 K7EMI3 77 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 RPL11P62913 178 aaKnown RBP16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 WFDC3Q8IUB2 231 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 MYOZ3Q8TDC0 251 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 RELNP78509 3460 aa16.63■□□□□ 0.25
SMARCD2-201ENST00000225742 S100A4P26447 101 aaKnown RBP16.62■□□□□ 0.25
SMARCD2-201ENST00000225742 ID1P41134 155 aa16.62■□□□□ 0.25
SMARCD2-201ENST00000225742 C20orf78Q9BR46 151 aa16.62■□□□□ 0.25
SMARCD2-201ENST00000225742 DPH3P1Q9H4G8 78 aa16.62■□□□□ 0.25
SMARCD2-201ENST00000225742 IGKCP01834 107 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 Q6ZS46 218 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 A6NDN8 102 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 M0R381 172 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 DPM2O94777 84 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 ANXA2RQ3ZCQ2 193 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 TM4SF20Q53R12 229 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 SMIM2Q9BVW6 85 aa16.61■□□□□ 0.25
SMARCD2-201ENST00000225742 CACNA1BQ00975 2339 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 J3QLI3 93 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 HLA-DRB4P13762 266 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 LINC01356Q8N9X3 169 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 FOXC2Q99958 501 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 PHLDA3Q9Y5J5 127 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 HLA-DRB4X5D2U9 266 aa16.6■□□□□ 0.25
SMARCD2-201ENST00000225742 NCOR2Q9Y618 2525 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 TRAV26-2A0A0B4J265 109 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 PPP1R17O96001 155 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 AVPP01185 164 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 RNASE4P34096 147 aaKnown RBP16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 HHLA3Q9XRX5 114 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 AKAP6Q13023 2319 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 ORMDL2Q53FV1 153 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 HIGD1BQ9P298 99 aa16.59■□□□□ 0.25
SMARCD2-201ENST00000225742 NMUP48645 174 aa16.58■□□□□ 0.24
SMARCD2-201ENST00000225742 ADAMTSL5Q6ZMM2 481 aa16.58■□□□□ 0.24
SMARCD2-201ENST00000225742 OR4C5Q8NGB2 326 aa16.58■□□□□ 0.24
SMARCD2-201ENST00000225742 CBY3A6NI87 242 aa16.57■□□□□ 0.24
SMARCD2-201ENST00000225742 J3KRW8 73 aa16.57■□□□□ 0.24
SMARCD2-201ENST00000225742 NXPH4O95158 308 aa16.57■□□□□ 0.24
SMARCD2-201ENST00000225742 PSMB8P28062 276 aa16.57■□□□□ 0.24
SMARCD2-201ENST00000225742 KLLNB2CW77 178 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 H3BRM9 83 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 K7EP13 123 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 POM121L12Q8N7R1 296 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 CHD8Q9HCK8 2581 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 C7orf71A4D174 169 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 SUMO2P61956 95 aaKnown RBP16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 LCNL1Q6ZST4 164 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 PCP2Q8IVA1 136 aa16.56■□□□□ 0.24
SMARCD2-201ENST00000225742 A0A087WX48 190 aa16.55■□□□□ 0.24
SMARCD2-201ENST00000225742 TRAV12-1A0A0B4J245 112 aa16.55■□□□□ 0.24
SMARCD2-201ENST00000225742 AP1S3Q96PC3 154 aa16.55■□□□□ 0.24
SMARCD2-201ENST00000225742 ODF3Q96PU9 254 aa16.55■□□□□ 0.24
SMARCD2-201ENST00000225742 F6UB75 175 aa16.54■□□□□ 0.24
SMARCD2-201ENST00000225742 RASL10AQ92737 203 aa16.54■□□□□ 0.24
SMARCD2-201ENST00000225742 DEFB112Q30KQ8 113 aa16.54■□□□□ 0.24
SMARCD2-201ENST00000225742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 RNASE3P12724 160 aaKnown RBP16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 PLNP26678 52 aa16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 DEFB1P60022 68 aa16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 DCANP1Q8TF63 244 aa16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 ITPR1Q14643 2758 aa16.53■□□□□ 0.24
SMARCD2-201ENST00000225742 C14orf178Q8N769 122 aaPredicted RBP16.52■□□□□ 0.24
SMARCD2-201ENST00000225742 TOMM6Q96B49 74 aa16.52■□□□□ 0.24
SMARCD2-201ENST00000225742 GNRH2O43555 120 aa16.52■□□□□ 0.23
SMARCD2-201ENST00000225742 IGHV4-59P01825 116 aa16.52■□□□□ 0.23
SMARCD2-201ENST00000225742 RPL32P62910 135 aaKnown RBP16.52■□□□□ 0.23
SMARCD2-201ENST00000225742 AMMECR1LQ6DCA0 310 aa16.52■□□□□ 0.23
SMARCD2-201ENST00000225742 IGKV3-7A0A075B6H7 116 aa16.51■□□□□ 0.23
SMARCD2-201ENST00000225742 MRPL35Q9NZE8 188 aaKnown RBP16.51■□□□□ 0.23
SMARCD2-201ENST00000225742 A0A096LNT2 108 aa16.5■□□□□ 0.23
SMARCD2-201ENST00000225742 C9orf118A6NHY6 69 aa16.5■□□□□ 0.23
SMARCD2-201ENST00000225742 ZC2HC1BQ5TFG8 222 aa16.5■□□□□ 0.23
SMARCD2-201ENST00000225742 FAM159AQ6UWV7 190 aa16.5■□□□□ 0.23
SMARCD2-201ENST00000225742 IGKV2D-26A0A0A0MRZ7 120 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 H7C1H1 209 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 TCTAP57738 103 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 CBY1Q9Y3M2 126 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 LINC01549A6NIU2 74 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 MGPP08493 103 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 TMEM95Q3KNT9 176 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 TMEM160Q9NX00 188 aa16.49■□□□□ 0.23
SMARCD2-201ENST00000225742 TRAV8-6A0A0B4J262 113 aa16.48■□□□□ 0.23
SMARCD2-201ENST00000225742 GTSCR1Q86UQ5 136 aa16.48■□□□□ 0.23
SMARCD2-201ENST00000225742 SCGB3A1Q96QR1 104 aa16.48■□□□□ 0.23
SMARCD2-201ENST00000225742 KIF25-AS1Q9Y6Z4 181 aa16.48■□□□□ 0.23
SMARCD2-201ENST00000225742 IGHV4OR15-8A0A075B7B6 117 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 A0A087WW49 117 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 F8VRH5 84 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 LGALS9O00182 355 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 SRD5A1P18405 259 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 ERASQ7Z444 233 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 RPL39LQ96EH5 51 aaKnown RBP16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 PKD1L2Q7Z442 2459 aa16.47■□□□□ 0.23
SMARCD2-201ENST00000225742 RNF223E7ERA6 249 aa16.46■□□□□ 0.23
SMARCD2-201ENST00000225742 ELANEP08246 267 aa16.46■□□□□ 0.23
SMARCD2-201ENST00000225742 SNRPD3P62318 126 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms