RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TMEM256-PLSCR3K7ERE1 68 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 PFDN6O15212 129 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 SSNA1O43805 119 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 PSME3P61289 254 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 HIST2H3PS2Q5TEC6 136 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 OR4B1Q8NGF8 309 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 RAB8BQ92930 207 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 OR51I1Q9H343 314 aa-3.43□□□□□ -2.96
LMBR1-222ENST00000638959 hCG_1818297A0A087WSY0 165 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 A8MT66 165 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 F8VZ95 297 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 RER1O15258 196 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 PET100P0DJ07 73 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 DEFA3P59666 94 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 RHOHQ15669 191 aa-3.44□□□□□ -2.96
LMBR1-222ENST00000638959 CEP164Q9UPV0 1460 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 TAX1BP3O14907 124 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 GGCTO75223 188 aaKnown RBP-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 APOC1P02654 83 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 PIGPP57054 158 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 FADDQ13158 208 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 CLEC6AQ6EIG7 209 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 OR8J3Q8NGG0 315 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 SLC35B4Q969S0 331 aa-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 WRNQ14191 1432 aaPredicted RBP eCLIP-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-3.45□□□□□ -2.96
LMBR1-222ENST00000638959 H0YIV9 168 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 CSTAP01040 98 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 ACOT6Q3I5F7 207 aaPredicted RBP-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 PIGYQ3MUY2 71 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 DEFB105AQ8NG35 78 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 OR5A2Q8NGI9 324 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 TPRKBQ9Y3C4 175 aa-3.46□□□□□ -2.96
LMBR1-222ENST00000638959 NBASA2RRP1 2371 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 I3L2K1 104 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 CST8O60676 142 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 IFNA4P05014 189 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 BCL2P10415 239 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 Q3ZCU0 254 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 SLC48A1Q6P1K1 146 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 FAM216BQ8N7L0 139 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 SDF2Q99470 211 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 OR52A5Q9H2C5 316 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 SCP2D1Q9UJQ7 156 aa-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 LSM5Q9Y4Y9 91 aaKnown RBP-3.47□□□□□ -2.96
LMBR1-222ENST00000638959 SMLR1H3BR10 107 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 M0R2P5 195 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 ATP5HO75947 161 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 LCN1P31025 176 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 S100A3P33764 101 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 DNAJB13P59910 316 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 OR4S1Q8NGB4 309 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 C19orf12Q9NSK7 152 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 AKAP11Q9UKA4 1901 aa-3.48□□□□□ -2.97
LMBR1-222ENST00000638959 FGD6Q6ZV73 1430 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 CALUO43852 315 aaPredicted RBP-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 CST7O76096 145 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 OR5AK2Q8NH90 309 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 MAP1LC3BQ9GZQ8 125 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 DNAH11Q96DT5 4516 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 CMYA5Q8N3K9 4069 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 EVC2Q86UK5 1308 aa-3.49□□□□□ -2.97
LMBR1-222ENST00000638959 CASKIN1Q8WXD9 1431 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 TRAV5A0A0B4J249 113 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 MFSD11O43934 449 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 C8GP07360 202 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 RPS12P25398 132 aaKnown RBP-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 C4orf33Q8N1A6 199 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 CT55Q8WUE5 264 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 DNAJB3Q8WWF6 145 aa-3.5□□□□□ -2.97
LMBR1-222ENST00000638959 DMXL1Q9Y485 3027 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 FMN1Q68DA7 1419 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 ACACAQ13085 2346 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 TRBV10-1A0A0K0K1A3 114 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 FAM236DA0A1B0GTK5 79 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 TMEM189A5PLL7 270 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 K7ERJ3 54 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 CDC42EP2O14613 210 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 DEGS1O15121 323 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 CRHP06850 196 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 FAM236CP0DP71 79 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 TMBIM6P55061 237 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 ARPP19P56211 112 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 MT1HP80294 61 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 ITGB3BPQ13352 177 aaPredicted RBP-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 OR6V1Q8N148 313 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 FRMPD1Q5SYB0 1578 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 WNK3Q9BYP7 1800 aa-3.51□□□□□ -2.97
LMBR1-222ENST00000638959 APOBP04114 4563 aaKnown RBP-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 NISCHQ9Y2I1 1504 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 GOLGA8KD6RF30 607 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 SERPINA1P01009 418 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 TRACP01848 142 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 TCL1AP56279 114 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 IAH1Q2TAA2 248 aaPredicted RBP-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 CCSMST1Q4G0I0 132 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 FAM151BQ6UXP7 276 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 OR2H1Q9GZK4 316 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 SCN3BQ9NY72 215 aa-3.52□□□□□ -2.97
LMBR1-222ENST00000638959 ASB4Q9Y574 426 aa-3.52□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms