RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 DYNAPQ8N1N2 210 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 VKORC1Q9BQB6 163 aa9.95□□□□□ -0.82
VPS52-218ENST00000482399 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 A0A096LNJ9 63 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 B9A039 149 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 F5H697 171 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 APOMO95445 188 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 ZNF418Q8TF45 676 aaPredicted RBP9.94□□□□□ -0.82
VPS52-218ENST00000482399 C16orf92Q96LL3 132 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 PTPN13Q12923 2485 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 MYO9AB2RTY4 2548 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 USP9YO00507 2555 aaPredicted RBP9.94□□□□□ -0.82
VPS52-218ENST00000482399 SVEP1Q4LDE5 3571 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 H7C2G1 150 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 FOXC1Q12948 553 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 MRGPRG-AS1Q2M3A8 158 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
VPS52-218ENST00000482399 TRGV3P03979 118 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 DLX6P56179 175 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
VPS52-218ENST00000482399 WFDC2Q14508 124 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 DTX2Q86UW9 622 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
VPS52-218ENST00000482399 TRBV25-1A0A075B6N4 114 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 OR11H12B2RN74 326 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 DEFB1P60022 68 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 OR11H1Q8NG94 326 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 OR11H2Q8NH07 326 aa9.93□□□□□ -0.82
VPS52-218ENST00000482399 NACAE9PAV3 2078 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 G3V318 75 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 LYPD1Q8N2G4 141 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 UBTD1Q9HAC8 227 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 FAM208BQ5VWN6 2430 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 CCL21O00585 134 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 NPFFR1Q9GZQ6 430 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 NXT2Q9NPJ8 142 aaKnown RBP9.92□□□□□ -0.82
VPS52-218ENST00000482399 SCGB1C2P0DMR2 95 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
VPS52-218ENST00000482399 SHISA9B4DS77 424 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 SRD5A1P18405 259 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 Q6ZQT7 251 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 CFHR4Q92496 578 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 TNFRSF14Q92956 283 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
VPS52-218ENST00000482399 ACACBO00763 2458 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 FGF6P10767 208 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 TMEM219Q86XT9 240 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 COL12A1Q99715 3063 aa9.91□□□□□ -0.82
VPS52-218ENST00000482399 TLN2Q9Y4G6 2542 aa9.9□□□□□ -0.82
VPS52-218ENST00000482399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
VPS52-218ENST00000482399 CD300EQ496F6 205 aaPredicted RBP9.9□□□□□ -0.82
VPS52-218ENST00000482399 PRO3102Q9H379 93 aa9.9□□□□□ -0.82
VPS52-218ENST00000482399 PHLDA3Q9Y5J5 127 aa9.9□□□□□ -0.82
VPS52-218ENST00000482399 IGKV3-20P01619 116 aa9.9□□□□□ -0.83
VPS52-218ENST00000482399 IGHV3-11P01762 117 aa9.9□□□□□ -0.83
VPS52-218ENST00000482399 AZU1P20160 251 aa9.9□□□□□ -0.83
VPS52-218ENST00000482399 C14orf178Q8N769 122 aaPredicted RBP9.9□□□□□ -0.83
VPS52-218ENST00000482399 FANCD2OSQ96PS1 177 aa9.9□□□□□ -0.83
VPS52-218ENST00000482399 WNK1Q9H4A3 2382 aa9.9□□□□□ -0.83
VPS52-218ENST00000482399 G3V4G9 280 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 ATP5LO75964 103 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 HTN1P15515 57 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 PIP4P2Q8N4L2 257 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 SIGMAR1Q99720 223 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 KAAG1Q9UBP8 84 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 CRYGBP07316 175 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 PDE6HQ13956 83 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 ODF1Q14990 250 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 VMO1Q7Z5L0 202 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 METTL26Q96S19 204 aa9.89□□□□□ -0.83
VPS52-218ENST00000482399 PSMB2P49721 201 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 LAGE3Q14657 143 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 RAXQ9Y2V3 346 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 CIDEAO60543 219 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 CCDC144NLQ6NUI1 221 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 ZNF562Q6V9R5 426 aa9.88□□□□□ -0.83
VPS52-218ENST00000482399 CTSGP08311 255 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 AGPAT4-IT1Q9H0P7 198 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 GAGE13Q4V321 117 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 MAPKAPK5-AS1Q8N8E1 139 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 LY6EQ16553 131 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 C3orf36Q3SXR2 165 aa9.87□□□□□ -0.83
VPS52-218ENST00000482399 ZNF493Q6ZR52 646 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 PGPEP1Q9NXJ5 209 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 ZNF292O60281 2723 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 TMEM170BQ5T4T1 132 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 CEND1Q8N111 149 aa9.86□□□□□ -0.83
VPS52-218ENST00000482399 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
VPS52-218ENST00000482399 SRSF1Q07955 248 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS52-218ENST00000482399 IGFL3Q6UXB1 125 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 CHTOPQ9Y3Y2 248 aaKnown RBP9.85□□□□□ -0.83
VPS52-218ENST00000482399 HIVEP3Q5T1R4 2406 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms