RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 TRAV40A0A0B4J280 105 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 IGHV4-38-2P0DP08 117 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 COX8AP10176 69 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 NMUP48645 174 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 PCP2Q8IVA1 136 aa8.3□□□□□ -1.08
VPS52-217ENST00000478934 IGKV3D-20A0A0C4DH25 116 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 GOSR1O95249 250 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 TRGV3P03979 118 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 DEFB125Q8N687 156 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 U3KQK5 164 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 IGHV3-11P01762 117 aa8.29□□□□□ -1.08
VPS52-217ENST00000478934 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 A0A1B0GW15 77 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 HBDP02042 147 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 FGF6P10767 208 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
VPS52-217ENST00000478934 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 NRGNQ92686 78 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 IFI27L1Q96BM0 104 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 PRORYQ9H606 182 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 FABP5P3A8MUU1 101 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 SMAD7O15105 426 aaKnown RBP8.28□□□□□ -1.08
VPS52-217ENST00000478934 SFTPCP11686 197 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 PAX8Q06710 450 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 C12orf54Q6X4T0 127 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 RAB37Q96AX2 223 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 EEF1AKMT3Q96AZ1 226 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 KLK15Q9H2R5 256 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
VPS52-217ENST00000478934 TRAV41A0A0B4J266 112 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 K7EMI3 77 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 K7EP13 123 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 BMI1P35226 326 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 PCP4P48539 62 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 PRR9Q5T870 116 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 C7orf71A4D174 169 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 EDN2P20800 178 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 LEPP41159 167 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 RBX1P62877 108 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 BLCAPP62952 87 aa8.27□□□□□ -1.09
VPS52-217ENST00000478934 ACACBO00763 2458 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 FBN2P35556 2912 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 DEFB104AQ8WTQ1 72 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 METTL26Q96S19 204 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 UFC1Q9Y3C8 167 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 IGKV2D-26A0A0A0MRZ7 120 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 TNFRSF6BO95407 300 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 TMEM97Q5BJF2 176 aa8.26□□□□□ -1.09
VPS52-217ENST00000478934 IGHV4-30-2A0A087WSY4 118 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 IGHV1-69DA0A0B4J2H0 117 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 IGHV1-69P01742 117 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 CBY1Q9Y3M2 126 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 DOPEY1Q5JWR5 2465 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 DOPEY2Q9Y3R5 2298 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 FBLL1A6NHQ2 334 aaKnown RBP8.25□□□□□ -1.09
VPS52-217ENST00000478934 F6UB75 175 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 SRD5A1P18405 259 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 C16orf92Q96LL3 132 aa8.25□□□□□ -1.09
VPS52-217ENST00000478934 FAM208BQ5VWN6 2430 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 H3BUX3 64 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 AVPP01185 164 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 PRSS1P07477 247 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 ARL3P36405 182 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 LGALS9BQ3B8N2 356 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 GPHB5Q86YW7 130 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 MAP1LC3AQ9H492 121 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 MOB4Q9Y3A3 225 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 MXRA5Q9NR99 2828 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 CD5LO43866 347 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 RPS20P60866 119 aaKnown RBP8.24□□□□□ -1.09
VPS52-217ENST00000478934 TMEM95Q3KNT9 176 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 LINC01559Q495D7 138 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 C19orf54Q5BKX5 351 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 TMEM158Q8WZ71 300 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 JMJD8Q96S16 334 aa8.24□□□□□ -1.09
VPS52-217ENST00000478934 AGRNO00468 2067 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 SORL1Q92673 2214 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 H3BUT2 72 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 RPL11P62913 178 aaKnown RBP8.23□□□□□ -1.09
VPS52-217ENST00000478934 WFDC12Q8WWY7 111 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 FOXC2Q99958 501 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 U3KQE9 123 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 IGHV7-4-1A0A0J9YVY3 117 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 H3BVH4 76 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 KLK9Q2XQG4 91 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms