RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CCL19Q99731 98 aa13.93□□□□□ -0.18
HPS3-202ENST00000460120 IGHV1-69DA0A0B4J2H0 117 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 IGKV3D-20A0A0C4DH25 116 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 IGHV1-69P01742 117 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 ARL3P36405 182 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 PAX8Q06710 450 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 LINC01545Q5VT33 79 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 Q6ZS46 218 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 PIFOQ8TCI5 191 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 SCRT2Q9NQ03 307 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 UFC1Q9Y3C8 167 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS3-202ENST00000460120 TRAV26-2A0A0B4J265 109 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 H3BUX3 64 aa13.92□□□□□ -0.18
HPS3-202ENST00000460120 PIEZO1Q92508 2521 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 TRBV7-1A0A0A6YYK4 115 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 SMAD7O15105 426 aaKnown RBP13.91□□□□□ -0.18
HPS3-202ENST00000460120 RPS20P60866 119 aaKnown RBP13.91□□□□□ -0.18
HPS3-202ENST00000460120 BLCAPP62952 87 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 RNF185Q96GF1 192 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 KLK15Q9H2R5 256 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 U3KQK5 164 aa13.91□□□□□ -0.18
HPS3-202ENST00000460120 IGHV4-30-2A0A087WSY4 118 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 CCL25O15444 150 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 ATP5J2P56134 94 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 ZNF738Q8NE65 137 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 SLC50A1Q9BRV3 221 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 PIMREGQ9BSJ6 248 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 SRD5A1P18405 259 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 C20orf173Q96LM9 149 aa13.9□□□□□ -0.18
HPS3-202ENST00000460120 CBY3A6NI87 242 aa13.89□□□□□ -0.19
HPS3-202ENST00000460120 PF4V1P10720 104 aa13.89□□□□□ -0.19
HPS3-202ENST00000460120 TMEM190Q8WZ59 177 aa13.89□□□□□ -0.19
HPS3-202ENST00000460120 CENPEQ02224 2701 aa13.89□□□□□ -0.19
HPS3-202ENST00000460120 USP9XQ93008 2570 aaPredicted RBP13.88□□□□□ -0.19
HPS3-202ENST00000460120 HBDP02042 147 aa13.88□□□□□ -0.19
HPS3-202ENST00000460120 PRR9Q5T870 116 aa13.88□□□□□ -0.19
HPS3-202ENST00000460120 COX8CQ7Z4L0 72 aa13.88□□□□□ -0.19
HPS3-202ENST00000460120 RAB9AP51151 201 aa13.88□□□□□ -0.19
HPS3-202ENST00000460120 CHTOPQ9Y3Y2 248 aaKnown RBP13.88□□□□□ -0.19
HPS3-202ENST00000460120 F6UB75 175 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 PTTG1IPP53801 180 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 POLQO75417 2590 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 CSPG4Q6UVK1 2322 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 LEPP41159 167 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 TMEM95Q3KNT9 176 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 DKK2Q9UBU2 259 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 COX11Q9Y6N1 276 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 MYO18BQ8IUG5 2567 aa13.87□□□□□ -0.19
HPS3-202ENST00000460120 H3BVH4 76 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 TNFRSF6BO95407 300 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 IGSF10Q6WRI0 2623 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 FBLL1A6NHQ2 334 aaKnown RBP13.86□□□□□ -0.19
HPS3-202ENST00000460120 EDN2P20800 178 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 WFDC12Q8WWY7 111 aa13.86□□□□□ -0.19
HPS3-202ENST00000460120 BVES-AS1Q5T3Y7 98 aa13.85□□□□□ -0.19
HPS3-202ENST00000460120 SPANXN1Q5VSR9 72 aa13.85□□□□□ -0.19
HPS3-202ENST00000460120 MAPK1IP1LQ8NDC0 245 aa13.85□□□□□ -0.19
HPS3-202ENST00000460120 TMEM238LA0A1B0GVL6 79 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 NMUP48645 174 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 KIR3DS1Q14943 382 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 VAMP3Q15836 100 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 ZFYVE26Q68DK2 2539 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 CACNA1AO00555 2505 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 C10orf105Q8TEF2 133 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
HPS3-202ENST00000460120 RBAKDNA6NC62 111 aa13.83□□□□□ -0.2
HPS3-202ENST00000460120 M0R381 172 aa13.83□□□□□ -0.2
HPS3-202ENST00000460120 AVPP01185 164 aa13.83□□□□□ -0.2
HPS3-202ENST00000460120 HIST1H1AQ02539 215 aaPredicted RBP13.83□□□□□ -0.2
HPS3-202ENST00000460120 TM4SF20Q53R12 229 aa13.83□□□□□ -0.2
HPS3-202ENST00000460120 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
HPS3-202ENST00000460120 FAM223BA6NKX1 122 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 COX8AP10176 69 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 FAM223AQ8IWN6 122 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 OR4X2Q8NGF9 303 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 HIF1ANQ9NWT6 349 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 IGHV7-4-1A0A0J9YVY3 117 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 C2orf91Q6ZV80 131 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 DEFB104AQ8WTQ1 72 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 ORAOV1Q8WV07 137 aa13.82□□□□□ -0.2
HPS3-202ENST00000460120 PRSS1P07477 247 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 GPHB5Q86YW7 130 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 TMEM158Q8WZ71 300 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 U3KQE9 123 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 ZANQ9Y493 2812 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 CIDEAO60543 219 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 C19orf54Q5BKX5 351 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 TTTY13Q9BZ97 58 aa13.81□□□□□ -0.2
HPS3-202ENST00000460120 K7EP13 123 aa13.8□□□□□ -0.2
HPS3-202ENST00000460120 PCP2Q8IVA1 136 aa13.8□□□□□ -0.2
HPS3-202ENST00000460120 USP9YO00507 2555 aaPredicted RBP13.8□□□□□ -0.2
HPS3-202ENST00000460120 ACACBO00763 2458 aa13.8□□□□□ -0.2
HPS3-202ENST00000460120 RNASE4P34096 147 aaKnown RBP13.8□□□□□ -0.2
HPS3-202ENST00000460120 TAX1BP3O14907 124 aa13.79□□□□□ -0.2
HPS3-202ENST00000460120 C10orf99Q6UWK7 81 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms